Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1033 ATGCAAAGGTATCATGCTGGCAGCTGCACTAGTGCAGTTAATAACAGTGCAATTGGTGGACCATCTGCCAGGGACACAGGAAGGTCTGATTCACCTTCTTTGCCTGCTAACTTCTCTGTAAGTTCAAGGCGACAACCACCGTTAAACTCATACAAGTTGAAGTGTGATAAAGAACCCTTGAACTCTAGGCTTGGCGCACCAGACTTTCATCCCCAAACATCAAATTGTCCTGAGGAGACCCTGACCAGAGAATATTTGCAATCTGGATACAGGGACACAGTTGAGGGACTTGAGGAAGCCAGAGAAATTTCTCTGACTCAGGTTCCGCATTTTAACAAGAATGTTGTTCTTAATTGCAAAGAGGCTATTAGAAAACGTCTGAGGGCCATTAATGAATCTCGTGCTCAGAAGAGGAAGGCTGGTCAAGTATATGGTGTAGCTCTTTCAGGATCACAACTTTCCAGGTCTGGAATTTTCCCTGAACTAAGACCTTGTGGTGAGGACTTCCAGAAAAAATGGATTGAGGGTTTATCTCAGCAGCACAAGCGATTACGATCTTTAGCTGATCATGTTCCTCATGGTTATAAAAGGGCATCACTTTTAGATGTTCTTATAAGGAATAACGTTCCATTGCTTAGGGCCACCTGGTTCATCAAGGTTACATACCTCAATCAGGTTCAACCTGGTTCTGTTGGTATTTCTTCTGGAACTGCTGACAAGATTCAACTGTCTCGCTCTGATGTTTGGACCAAAGATGTTATCAATTACTTGCAAGCCCTTCTGGATGAATTTTTGTCAAAGAATGTTTCCCATTCTGCTTCTCACGCTCGAGAGAGATCACCACAAATGCCTGGATCACTGCAGAACAAAAGTGATCCATTGTCATCTGTTTCAGACGGTGAAGGACCATCCTTACATTTTAGATGGTGGTATATTGTACGGCTCCTGCAATGGCATCATGCTGAAGGGCTGCTTCATCCTTCTCTTGCCATTGATTGGGTGTTTAATCAACTACAGGAAAAAGATCTCCTTGAGGTTTGGCAGCTGTTATTGCCTATTATATATGGTTTTTTAGAAACTATTGTACTATCTCAAACTTATGTACGTACCCTTGCTGGACTAGCTCTTCGTGTCATTCGTGATCCTGCTCCAGGTGGTTCAGATCTAGTAGATAATTCCAGGAGGGCATATACAACTTGTGCTGTGATTGAGATGCTTCGGTATTTAATACTTGTGGTGCCAGATACTTTTGTTGCTTTGGATTGCTTTCCTTTACCTTCCTCTGTTATTTCACATGCAATGAACGATGGCAATTTTGTATTAAAATCAACTGAAGCTGCAGGGAAGGTAAAAAATAGTTCAGATGATTTTGGTCACATTATTTCATGCATTCAGAAACATACAGAGGATCTTGCAAAGGCTTCAATCCCAGGCGCTCCAGGTCATTGTCTGGCTAAAGTGGCAAAAGCCTTGGATAAAGCTCTTGTTCTGGGTGATTTGCGTGTTGCATATAAATTTCTTTTTGAAGATCTTTGTGGTGGAACTGTATCTGAAGGCTGGGTTGCAAAAGTCAGCCCTTGCTTAAGGTTATCTATGAAATGGTTTGGGACTGTGAGTACATCCCTTATATATTCTGTGTTTTTCCTTTGTGAGTGGGCAACATGTGATTTTAGGGATTTTCGTGGTACCCGTCCTCGTGACATTAAGTTTACTGGTAGGAAAGATATCTCCCAGGTGCATGTAGCAGTTAGGCTTTTAAAGATGAAGATTAGGGATGTGAAGATATCGCTAAAACAAACAAATGAATATCATGGAGCCAGTCGTTTTGCAAAGACGAATCAGCAGCCTAATTGGAATTATGTGGGCAAAGTATCCAGACTGAAATCTAGTTCAAAGAGTACAGGTTCTTCAGTTATATTTGAAAGCCCGGGACCTCTACATGATATTATAGTTTGTTGGATTGATCAGCATGTGGTACATAAAGGGGAAGGTTCCAAGCGCATACAACTATTTATTGTGGAACTCATACGTGCTGGCATCTTTTACCCCTTGGCATATGTACGCCAGTTAATAGTCAGTGGGATCATGGATGGCAATGTAAATTTGGTTGATATGGAGCGACGGAGGAGACACTATCACATCTTAAAGCAGCTACCTGGATGCTTTATCCATGATGTTTTGGAAGAATCAGGAATTGTTGAAGGGGCGCAGCTCAAAGTAGCCTTGCAAATTTACTTGAATGAACGTCACCTCATACTTCGGGGTCCTCTGAGCGAGTCCCATGATGATGCCAGTGGTTCCAATTTATCTGCTCTGAAGAGAAAAAAATATCCTGCCTCGATGAAGGATGAAGCTTCTGGAATGGCAATTGATCAGAGAAATGTTATTTCTATCACAAAAAATACAAAGAATAATGCTAACATTGAAGAACTAAGAACAGCTATTTCAGTACTGTTACAGTTTCCTAATTGTTCATCTAATTTGAGTGCTACAGGTTGTGATGAATCTGAAGGCAGTGTTAGAAGACCTATTGGGTCTCAGTACAGCAAAAATGATCCAGTAGAGGGTACACCTGGGTGTGAAGAATGTATCAGAACAAAGAGACAAAAGTTAAGTGAGGAAAGAAACTCATTTGTACAAGGGAATTCCCCTGTTCAATCTGATGATGATGATACATGGTGGTTGAAAAAGGGAATGAAATCCCCAGAGCCTCTCAAAGTTGATCAACCACAAAAGTCAACCAAGCTGGTCACCAAGAGTCGGCAGAAGAATGTGCGTAAAACTCAAAGTCTTGCTCAACTGGCAGCTTCTAGAATTGAGGGTAGCCAAGGGGCATCTACTAGTCATGTTTGTGGAAGCAAGGTAAGCTGCCCTCACCATAAAACTGCTATGGATGTAGATGGGCAGAGGTCTGTGGATAGCATACGGACAAGTCATTTTGGAGATATAGTTTCCATTGGAAAAGCTCTAAAGCAGCTACGTTTTGTTGAGAAAAGGGCAATAGCCATTTGGCTGCTGACTGTTGTTAGACAGGTAATTGAAGAGATGGATAAAAATGTTGGTAAAGTTGGTCAGTTTGGCAGGCCTTTTTCTGTTGCAGATGATAAAAGCTCAATACAGTGGAAACTGGGTGAGGATGAACTTTCTGCAATACTTTATTTGATGGATATATCCCATGATTTGGTATCAGCTGTCAAGTTCCTCCTTTGGTTGCTGCCAAGGGTTCTTAATAGCCCCAATTCTACAATTCATTCTGTGAGGAATGTGTTGATGCTAGCAAGGAATGTGGAAAACCAAGTTTGTGACGTGGGAGAGGCTTTTCTGCTTTCATCACTGAGAAGGTATGAGAATATTCTTGTTGCAGCAGACCTTATTCCAGAAGCCCTGTCATCTGCAATGCGTCGAGCTGCCACGATTATTGCATCTAATGGAAGAGTTTCAGGGTCAGGAGCACTAGCTTTTGCTCGGTACTTGTTGAGAAAATACAGCACTGTGGCTAGTGTCATTGAGTGGGAGAAAACTTTTAAGGCTACATGTGATGCTAGACTTTCCTCTGAACTTGACTCTTGTAGGTCAGTGGATGGAGAGTTAGGGCTGCCCCTAGGAGTTCCAGCCGGAGTTGAAGACCATGATGATTTTTTCCGTCAAAAGATCAGTGGCGGTCGGTTGCCATCCAGAGTAGGTGCAGGCATGAGGGAGGTAGTGCAGCGTAATGTTGAAGAAGCATTCCACTGTCTTTTTGGAAAGGACAGAAAGCTCTTTGCTGCTGGTACACTAAAAGGTCTTCCTCCTGTAGAGAAATGGGACAATGGATACCAAATTGCTCAACAAATAGTTATGGGTTTGATTGATTGCATAAGGCAGACTGGTGGTGCTGCACAAGAAGGAGATCCCTCTTTGGTCTCTTCTGCGGTTTCTGCAATTGTTGGCAGTGTTGGTCCAACTTTAGCAAAAATGCCTGATTTTTCATCTGGCAACAATCATTCAAATATTACATCAGCTTCAAATTTATTGAACTATGCCAGGTGCATTCTGCGAATGCATATAACCTGTTTAGGCCTGCTTAAGGAAGCCCTAGGAGAACGACAAAGCCGTGTATTTGATATTGCACTTGCTACTGAAGCTTCTACTGCTCTTGCTGGTGTTTTCACTCCTAGTAAAGCATCTCGTGCTCAGTTTCAAACATATCCTGAAGTCCATGAATCTAGTAACACTATTTCAAATGATATGGGAAACAATTCTAATAAAGTTGTGGTAGCAAAAACCACAAAAATTGCTGCTGCTGTTTCTGCACTTTTTGTTGGTGCAATTATACATGGTGTTACCAGCCTGGAAAGAATGGTAACAGTTCTCAGATTGAAGGAGGGTCTCGATGCAGTACAATTTGTAAGAAGCACGAGATCCAATTCAAATGGAAATGCACGTTCAGTTATGGCTTTTAAGATGGATAATTCAATTGAAGTTCATGTGCATTGGTTTAGACTGCTTGTTGGAAACTGCCGAACAATCTGTGAAGGGTTAGTGGTGGAACTCTTGGGTGAACCATTTATTATGGCTCTTTCAAGGATGCAACGTATGCTCCCTTTAAATTTGGTCTTTCCACCTGCCTATTCAATATTTGCCTTTGTTAGGTGGCGGCCTTTTATTTTGAATGCTACAGTTCGTGAAGACATGAATCAAATTTATCAGTCTCTTGTAGTGGCCATAACTGAAGCAATAAAGCATTTGCCATTTCGAGATGTATGTTTTAGAGATTGTCAGGGTCTTTATGATCTTATGGCAGCAGATAATAGTGATTCTGAATTTGCAAGCCTGCTAGAGTTTAATGGTTCTGACATGCATTTAAAACTCACAGCATTTGTCCCTCTACGCTCTAGGCTTTTCCTTAACGCCATTATTGATTGTAAGATGCCACAATCTATTTATGCAAAGGATGATGGGAGCCGAATTTCTGGACCTGGTGAGTCTAAAGTTCAACTCACAGATAGTGGGTCTAAGCTTCAGGATATGCTTGTGCATGTTTTGGATACCTTGCAACCTGCCAAATTTCACTGGCAGTGGGTTGTCCTCAGGTTACTTTTAAATGAACAAGCCCTCATTGAAAAAGTGGAGAATCATGATGTGCCCTTGTCTGACGCTATAAAGTTGTCCTCACCTAGTCCTGAGAAGGCTGCTAGTGCTTCTGAGAATGAGAACAATTTTATTCAAATACTTCTCACAAGGTTACTGGTTAGACCTGATGCTGCACCCCTTTTTTCAGAGTTGATTCATCTCTTTGGTAGGTCTGTCGAGGATTCAATGTTGTTGCAAGCTAAATGGTTCCTTGGAGGCCAGGATGTCCTCTTTGGTCGGAAGGCCATCAGACAAAAGCTGCATAACATTGCTGTGAATAAAAAGCTTTCTGTGAAGACCCAATTTTGGGAACCTTGGGGTTGGTGTAGTCCATCTACTGATTCATCAACTATCAAGGGGGAGAACAAGAAGTTTGACAGCACCTCTCTTGAAGAAGGAGAAGTTGTTGAAGAGGGAACAGATTTGAAAAGGTGCCAGCAGCAAGTGATTGAGAGGGCTCTTATCGAGTTACTTCTTCCTTGCATAGATCAAAGCTCTGATGAAGCTCACAATTCTTTTGCAACTGACTTGGTGAAACAGTTGAGTTTTATTGAGACACACATAACTGCTGTTACAGGTGGAAGTAAACCAGTGGGAAGTGCTCCTCCGGGAGTTGAAGGTCAGCCAAATAAAGTAAATAACCGCAAAAATATGAGAACTGGAAGCACTGCATTAGCTAGACGACCAACAGTGGCAGCAGATTCTTCTCCACCATCTCCTGCAGCCCTACGAGCTTCTATGTCATTACGGTTGCAGTTGCTCCTGAGATTTCTTCCTATTCTTTGCACTGACAGGGAGCCATCTGTGCGGAGCACGAGACAATTTCTAGCCTCTGTTATTTTTCGTCTCCTTGGTAGTCGGGTTGTTCATCAGGATGCAGGCATTTCAGCAAATGCTGTTCCTCTGCCAATGAGGGAGGCAGAGTCATCTTCTGAAGTTGCTTCTGTGGATTCTTCTTCTCAGAGTCTGTTTGATCGTTTGCTGTTGGTTTTGCATGGGTTGCTAAGTAGTTATCCTCCAAGCTGGCTCAGGCCAAAGCCTTCAAAGACAAGCAATGAACCTACAATTGATCGAGAATGGTTGGAGACTTTGCAGAATGACTTGGATCGTATGCAACTACCTGACACTGTTCGGTGGCGAATCCAAGCTGCAATGCCGATACTCATCCCCTCTATGCGGTGCTCTCTATCCTGCCAGCCACCATCTGTTTCAAATTCTGCTCTTATGTGCATTCAACCCAGCACTACAAATCCTGGGGTTAACTCCAGTAGTTCAACTATCCCCCAGAGGAATCCAGCTCTATCAAGGGTTGCATCTAATGCATCAGGAAAGCCAAAACGCCAGGACAATGATTTGGAAATTGATCCTTGGACGCTTTTAGAAGATGGCGCTGGCTCTTTCCCTTTGCCAGGTAATACTGCTAGCATAGGAAGTGGTGATCATGTTAATATTCGAGCCGCGAGCTGGCTGAAAGGAGCTGTAAGGGTGAGACGGACAGACCTCACATATGTTGGTGCAGTGGATGATGATAGTTGA 6648 0.4266 MQRYHAGSCTSAVNNSAIGGPSARDTGRSDSPSLPANFSVSSRRQPPLNSYKLKCDKEPLNSRLGAPDFHPQTSNCPEETLTREYLQSGYRDTVEGLEEAREISLTQVPHFNKNVVLNCKEAIRKRLRAINESRAQKRKAGQVYGVALSGSQLSRSGIFPELRPCGEDFQKKWIEGLSQQHKRLRSLADHVPHGYKRASLLDVLIRNNVPLLRATWFIKVTYLNQVQPGSVGISSGTADKIQLSRSDVWTKDVINYLQALLDEFLSKNVSHSASHARERSPQMPGSLQNKSDPLSSVSDGEGPSLHFRWWYIVRLLQWHHAEGLLHPSLAIDWVFNQLQEKDLLEVWQLLLPIIYGFLETIVLSQTYVRTLAGLALRVIRDPAPGGSDLVDNSRRAYTTCAVIEMLRYLILVVPDTFVALDCFPLPSSVISHAMNDGNFVLKSTEAAGKVKNSSDDFGHIISCIQKHTEDLAKASIPGAPGHCLAKVAKALDKALVLGDLRVAYKFLFEDLCGGTVSEGWVAKVSPCLRLSMKWFGTVSTSLIYSVFFLCEWATCDFRDFRGTRPRDIKFTGRKDISQVHVAVRLLKMKIRDVKISLKQTNEYHGASRFAKTNQQPNWNYVGKVSRLKSSSKSTGSSVIFESPGPLHDIIVCWIDQHVVHKGEGSKRIQLFIVELIRAGIFYPLAYVRQLIVSGIMDGNVNLVDMERRRRHYHILKQLPGCFIHDVLEESGIVEGAQLKVALQIYLNERHLILRGPLSESHDDASGSNLSALKRKKYPASMKDEASGMAIDQRNVISITKNTKNNANIEELRTAISVLLQFPNCSSNLSATGCDESEGSVRRPIGSQYSKNDPVEGTPGCEECIRTKRQKLSEERNSFVQGNSPVQSDDDDTWWLKKGMKSPEPLKVDQPQKSTKLVTKSRQKNVRKTQSLAQLAASRIEGSQGASTSHVCGSKVSCPHHKTAMDVDGQRSVDSIRTSHFGDIVSIGKALKQLRFVEKRAIAIWLLTVVRQVIEEMDKNVGKVGQFGRPFSVADDKSSIQWKLGEDELSAILYLMDISHDLVSAVKFLLWLLPRVLNSPNSTIHSVRNVLMLARNVENQVCDVGEAFLLSSLRRYENILVAADLIPEALSSAMRRAATIIASNGRVSGSGALAFARYLLRKYSTVASVIEWEKTFKATCDARLSSELDSCRSVDGELGLPLGVPAGVEDHDDFFRQKISGGRLPSRVGAGMREVVQRNVEEAFHCLFGKDRKLFAAGTLKGLPPVEKWDNGYQIAQQIVMGLIDCIRQTGGAAQEGDPSLVSSAVSAIVGSVGPTLAKMPDFSSGNNHSNITSASNLLNYARCILRMHITCLGLLKEALGERQSRVFDIALATEASTALAGVFTPSKASRAQFQTYPEVHESSNTISNDMGNNSNKVVVAKTTKIAAAVSALFVGAIIHGVTSLERMVTVLRLKEGLDAVQFVRSTRSNSNGNARSVMAFKMDNSIEVHVHWFRLLVGNCRTICEGLVVELLGEPFIMALSRMQRMLPLNLVFPPAYSIFAFVRWRPFILNATVREDMNQIYQSLVVAITEAIKHLPFRDVCFRDCQGLYDLMAADNSDSEFASLLEFNGSDMHLKLTAFVPLRSRLFLNAIIDCKMPQSIYAKDDGSRISGPGESKVQLTDSGSKLQDMLVHVLDTLQPAKFHWQWVVLRLLLNEQALIEKVENHDVPLSDAIKLSSPSPEKAASASENENNFIQILLTRLLVRPDAAPLFSELIHLFGRSVEDSMLLQAKWFLGGQDVLFGRKAIRQKLHNIAVNKKLSVKTQFWEPWGWCSPSTDSSTIKGENKKFDSTSLEEGEVVEEGTDLKRCQQQVIERALIELLLPCIDQSSDEAHNSFATDLVKQLSFIETHITAVTGGSKPVGSAPPGVEGQPNKVNNRKNMRTGSTALARRPTVAADSSPPSPAALRASMSLRLQLLLRFLPILCTDREPSVRSTRQFLASVIFRLLGSRVVHQDAGISANAVPLPMREAESSSEVASVDSSSQSLFDRLLLVLHGLLSSYPPSWLRPKPSKTSNEPTIDREWLETLQNDLDRMQLPDTVRWRIQAAMPILIPSMRCSLSCQPPSVSNSALMCIQPSTTNPGVNSSSSTIPQRNPALSRVASNASGKPKRQDNDLEIDPWTLLEDGAGSFPLPGNTASIGSGDHVNIRAASWLKGAVRVRRTDLTYVGAVDDDS* 2216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1033 2215 MobiDBLite consensus disorder prediction 2119 2157 - -
Pvu10g1033 2215 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 2215 - -
Pvu10g1033 2215 SMART Med12_2 158 219 IPR019035 GO:0003712|GO:0006357|GO:0016592
Pvu10g1033 2215 MobiDBLite consensus disorder prediction 1 48 - -
Pvu10g1033 2215 MobiDBLite consensus disorder prediction 2119 2149 - -
Pvu10g1033 2215 MobiDBLite consensus disorder prediction 907 923 - -
Pvu10g1033 2215 Pfam Transcription mediator complex subunit Med12 160 219 IPR019035 GO:0003712|GO:0006357|GO:0016592
Pvu10g1033 2215 MobiDBLite consensus disorder prediction 1898 1920 - -
Pvu10g1033 2215 MobiDBLite consensus disorder prediction 1 54 - -
Pvu10g1033 2215 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 1 2215 - -
Pvu10g1033 2215 MobiDBLite consensus disorder prediction 275 298 - -
Pvu10g1033 2215 MobiDBLite consensus disorder prediction 830 859 - -
Pvu10g1033 2215 MobiDBLite consensus disorder prediction 897 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1033 Pvu-Chr10 35277490 35294637 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1033 - - gmx:100781696 3746.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1033 10 35277490 35294637 Pvu10g1033 10 35277490 35294637 ECH