Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1029 ATGGACAATTCATCCAACTTTGATGAAAACTCTGATGTGGGGTACCAACCTTCACCTTCTTCTGTGGATCAAAACGACCATTCAATCACTGAAACTGTTGGATACTCCACATTCAGTGGCGATTCCTTTGTGTATTGCCGGACTAATTCGGAGGTCTCAAACTTCTCTGAGCCTATTGATGACAATAGCTTTGCAGGTGAACATTCACCTTCTCTATGGACACCTGTGAAACATGGAGCTAGTCAGGCTGTTCTTTCAAGGTTAGGAATGAAGCAGCCCAGGCACTCAATGGATGAGAAATCTGATGACCTTGACCTCTTGGAGTCAGAGCTTGATATGATGAGGGAAAGATTTTCAAAGCTTCTATTGGGGGAAGACATGTCTGGTGGTGGGAAAGGTGTTTGCACTGCAGTCACAATATCAAATTCAATCACCAATCTCTATGCAACTGTTTTTGGGCAGAATTTGAAGTTGGAGCCTCTCAACCCTGAGAAGAAGGCCATGTGGAAAAGAGAAATGAATTGTCTCCTATCTGTGTGTGATTACATAGTAGAATTTGCCCCAACTGCACAATATTTAGATGATGGTACAATTGTGGAGATGATGACAAGCAGACCAAGGTCAGATATTTATATTAACCTCCCAGCTCTTCAAAAGCTAGACACCATGCTCATAGAAATATTGGATAGTTTCCAGGATACTGAATTTTGGTATGCAGACCAAGGGAGCTTATCAGATAACTCAACTCGGTCACGTGCAGGCTCATTTCGAAGGATTGTTCAGAGGAAAGATGAGAAATGGTGGCTGCCAGTTCCTTGTGTTCACTCTGGGGGCCTGAATGATAAGTCAACAAAGCACTTGAATGAGAAAAGAGACTGTGCTAATCAAATTCATAAAGCAGCTATGGCTATAAATAGCAGTGTTCTAGCAGAGATGGACATCCCAGAAACATATCTGGCAAATCTTCCCAAGAGTGGAAGAACAAGTCTAGGGGACACAATTTACCGCTATATGTATTCTGCAGACAAGTTCTCACCAGATTACCTTCTTGATTGTCTCAAAATAAGCTCTGAACATGAAGCACTTGAGCTGGCAGACAAGGTTGAGTCTTCAATGTTCACTTGGAGGAGAAAAGCTTGTCTGAGCCATTCAAAAACATCATGGAACAAAGTTAAGGATCTCATGGCTGACACTGACCGAAGTGACAAAAACTACACCTTAGCTGAGAGAGCTGAGACCTTGTTGTTCTGCTTGAAGCAAAGATATCCTGAGCTCTCTCAAACATCCTTGGACACATGCAAGATTCAATACAACCGGGATGTAGGAAAAGCAATATTAGAGAGCTACTCAAGAGTACTAGAAGGCTTAGCATTCAACATTGTAGCTTGGATTGAAGATGTTCTTCATGCAGATAAATCAATGAGGAATCAAAATGTATAG 1440 0.4188 MDNSSNFDENSDVGYQPSPSSVDQNDHSITETVGYSTFSGDSFVYCRTNSEVSNFSEPIDDNSFAGEHSPSLWTPVKHGASQAVLSRLGMKQPRHSMDEKSDDLDLLESELDMMRERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLNPEKKAMWKREMNCLLSVCDYIVEFAPTAQYLDDGTIVEMMTSRPRSDIYINLPALQKLDTMLIEILDSFQDTEFWYADQGSLSDNSTRSRAGSFRRIVQRKDEKWWLPVPCVHSGGLNDKSTKHLNEKRDCANQIHKAAMAINSSVLAEMDIPETYLANLPKSGRTSLGDTIYRYMYSADKFSPDYLLDCLKISSEHEALELADKVESSMFTWRRKACLSHSKTSWNKVKDLMADTDRSDKNYTLAERAETLLFCLKQRYPELSQTSLDTCKIQYNRDVGKAILESYSRVLEGLAFNIVAWIEDVLHADKSMRNQNV* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1029 479 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 109 475 IPR005512 GO:0005085
Pvu10g1029 479 ProSiteProfiles PRONE domain profile. 101 479 IPR005512 GO:0005085
Pvu10g1029 479 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 323 479 IPR038937 GO:0005085
Pvu10g1029 479 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 324 IPR038937 GO:0005085
Pvu10g1029 479 MobiDBLite consensus disorder prediction 1 27 - -
Pvu10g1029 479 Gene3D PRONE domain, subdomain 1 104 344 - -
Pvu10g1029 479 Gene3D PRONE domain, subdomain 1 345 479 - -
Pvu10g1029 479 Coils Coil 97 117 - -
Pvu10g1029 479 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 324 - -
Pvu10g1029 479 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 323 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1029 Pvu-Chr10 35259349 35262357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1029 - - gmx:100785956 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1029 10 35259349 35262357 Pvu10g1029 10 35259349 35262357 ECH
Pvu8g0636 8 5694286 5697446 Pvu10g1029 10 35259349 35262357 PCT