Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1028 ATGAAGACAGCAATTCTTGAAGTACTTGTTGTTAATGCAAAAGGCATCACACACACGAATCTTGTAGGAAAACATAAGAAGCCTCACTGGAATCAGAAATTCATATTTGATTTGTCAGAGTTTGATTACAAGAATTCAACCCATCTTAAATGTAGAATCATGGACACAAAACTCTTCTCAAATGGTGGATTTGTTGGTGAAGCCAAAATTTTCTTAGGTGGAATAATATTGGAAGGAAGTGAGCAGGGATACATAGAAATAAAACCAGCTGCATATAACGTGGTCCTTCAAGATCACACTTACAAAGGAGAGATAAAGATTGGATTTAAATTCATTGGAAATAATAAT 348 0.342 MKTAILEVLVVNAKGITHTNLVGKHKKPHWNQKFIFDLSEFDYKNSTHLKCRIMDTKLFSNGGFVGEAKIFLGGIILEGSEQGYIEIKPAAYNVVLQDHTYKGEIKIGFKFIGNNN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1028 116 Pfam C2 domain 12 77 IPR000008 -
Pvu10g1028 116 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 113 IPR035892 -
Pvu10g1028 116 Gene3D C2 domain 3 113 IPR035892 -
Pvu10g1028 116 PANTHER C2 DOMAIN-CONTAINING 23 115 - -
Pvu10g1028 116 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 23 115 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1028 - - pvu:PHAVU_010G098600g 240.736