Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1024 ATGTCATTTTTGTGTGGGCTTCCTTTCCTTGAGTGTGTTTATTGTCTGGCCTGTGCTCGTTGGGCTTGGAAAAAATGTCTGTACAGTGCAGGCTATGAGAGTGAAAATTGGGGGCTGGCTACTGCACAAGAATTTGAGCCTGTGCCTCGATTCTGTCGGCTAATCTTAGCTGTCTACGAAGATGATATTCGTAACCCTCAATGGGCTCCCCAAGGAGGTTATGGCATCAATCCTGATTGGGTTATCTTGCGGAAGGACTACGGCGATAACGAAGGTCGTGTTACACCATACATGATATACCTTGATCACGATCATGCTGAAATCATACTGGCTGTTAGTGGACTCAATTTAGCAAAGGAAAGTGACTATGTTGTTTTGCTTGATAATAAGCTGGGTCAGGCGGAATTTCATGGTGGTTATGTTCATAATGGGCTATTGAAAGCAGCTGAATGGGTTTTTGATGCAGAACATGAGGTTCTTAGGAAGCTGGTGGCAGAAAATCCAACTTATATGTTAATATTTACAGGGCACTCTCTGGGGGCTGGGGTGGTGGCCTTGTTGACAATGCTAGCAGTTCATAATCGAGACAAATTGGGTATACCGAGAAACAAGATAAGGTGCTTTGCAATAGCTTCTCCTCGGTGTATGTCTCTCAACTTGGCTGTAAGATATGCAGATGTGATCAATTCTGTTGTACTTCAGGATGATTTTTTACCTCGGACAACTGCTGCTTTGGAAGATGTCTTCAAATCACTTTTATG 761 0.435 MSFLCGLPFLECVYCLACARWAWKKCLYSAGYESENWGLATAQEFEPVPRFCRLILAVYEDDIRNPQWAPQGGYGINPDWVILRKDYGDNEGRVTPYMIYLDHDHAEIILAVSGLNLAKESDYVVLLDNKLGQAEFHGGYVHNGLLKAAEWVFDAEHEVLRKLVAENPTYMLIFTGHSLGAGVVALLTMLAVHNRDKLGIPRNKIRCFAIASPRCMSLNLAVRYADVINSVVLQDDFLPRTTAALEDVFKSLL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1024 253 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Pvu10g1024 253 Pfam Lipase (class 3) 115 243 IPR002921 GO:0006629
Pvu10g1024 253 CDD Lipase_3 44 240 - -
Pvu10g1024 253 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 253 - -
Pvu10g1024 253 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 253 - -
Pvu10g1024 253 Gene3D alpha/beta hydrolase 38 247 IPR029058 -
Pvu10g1024 253 SUPERFAMILY alpha/beta-Hydrolases 44 242 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1024 Pvu-Chr10 35211548 35213387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1024 1 253 Miscellaneous Gene Families AT4G00500 71.260 4.77e-136 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1024 - - pvu:PHAVU_010G0983001 526.168