Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1022 ATGGAGAATGTAAATGATGAAAAAGAATCTTCAAATAGTGTCAATGAAGTAGAAGACACCAATTCTGCACTTATTTGTGGCCTTCCAGATGATATTTCTCTAATGTGTCTGGCAAGAGTTCCTAGAAAATATCATCCAGTCCTGAAGTGTGTCTCAAAGAGATGGAGGGACTTAATTTGCAACGAAGAGTGGTGCACTTATCGTCAGAAGCACAAACTGGATGAGACCTGGATTTATGCTCTGTGCAGGGACAAATTAAATGAGACTTTCTGTTATGTTTTGGATCCAACCGCCTCAGGAAGATATTGGAAGCTCGTTGATGGTCTTCCACCTCACATATCAAAAAGAAAAGGCATTGGTTTTGAAGCTTTGGGAAATAAGCTATTTTTATTGGGTGGTTGCAGATGGTCAAGAGATTGTACTGATGAGGTTTATTCATATGATGCTTCCTCAAACTGTTGGGTTCAAGCTGCTTCCATGCCAACTGCTAGGTGCTTCTTTGCTTGTGAAGTTTTGGATGAAAAACTATATGCTATTGGAGGATTAGTTTCAAATCCAAGCTATTCTCATTCTTGGGATACTTTTGACCCTCTGACAAATTGTTGGAGATCTCAGAGAGATGTTATTATTATTTCTGATGTTGAAGATTCAGTGATTCTTGATGGGAAGATATATGTTCGATTTTCCAGATATCCTGTAACTCCTTATGTAAGTGCTATTGTATATGAACCATCAAGTGGCACATGGCAGTATGCAGATGCTGACATGGTTTCAGGGTGGACAGGCCCTGCAGTTGTTGTGGATGACACCCTTTATGTCTTGGATCAAACTTTGGGAACTAGGTTAATGATGTGGCACAAAGAGAGACGCCAGTGGATACCTGTTGGAAAACTATCACCATTGCTTACTAGACCACCTTGTCAGCTTGTGGCAGTTGGTAGAAGCATTTTCATTGTTGGGAAAATGCTTAGCACTGTGGTTGTTGATGTTGGTGATTTGGGGAATGAGGGCCAGGTGATGACGACTTCTTCCATACCAGGACTGGCTTCTTCCATACCAAGATTGTCATCTGATTTCACTGTAATAAGTTGTAAATGCTTGTCTATCTAA 1110 0.4045 MENVNDEKESSNSVNEVEDTNSALICGLPDDISLMCLARVPRKYHPVLKCVSKRWRDLICNEEWCTYRQKHKLDETWIYALCRDKLNETFCYVLDPTASGRYWKLVDGLPPHISKRKGIGFEALGNKLFLLGGCRWSRDCTDEVYSYDASSNCWVQAASMPTARCFFACEVLDEKLYAIGGLVSNPSYSHSWDTFDPLTNCWRSQRDVIIISDVEDSVILDGKIYVRFSRYPVTPYVSAIVYEPSSGTWQYADADMVSGWTGPAVVVDDTLYVLDQTLGTRLMMWHKERRQWIPVGKLSPLLTRPPCQLVAVGRSIFIVGKMLSTVVVDVGDLGNEGQVMTTSSIPGLASSIPRLSSDFTVISCKCLSI* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1022 369 Pfam F-box domain 26 61 IPR001810 GO:0005515
Pvu10g1022 369 SUPERFAMILY Kelch motif 89 323 IPR015915 GO:0005515
Pvu10g1022 369 SMART fbox_2 28 68 IPR001810 GO:0005515
Pvu10g1022 369 SMART kelc_smart 175 221 IPR006652 GO:0005515
Pvu10g1022 369 SMART kelc_smart 127 174 IPR006652 GO:0005515
Pvu10g1022 369 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 6 336 - -
Pvu10g1022 369 Pfam Galactose oxidase, central domain 125 169 - -
Pvu10g1022 369 Gene3D - 67 343 IPR015915 GO:0005515
Pvu10g1022 369 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 6 336 - -
Pvu10g1022 369 SUPERFAMILY F-box domain 24 68 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1022 Pvu-Chr10 35189015 35192024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1022 28 303 Miscellaneous Gene Families AT4G33900 25.667 3.96e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1022 - - pvu:PHAVU_010G098100g 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1022 10 35189015 35192024 Pvu10g1022 10 35189015 35192024 ECH