Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1021 ATGGGGAATAGCAAGAAAAGGCTTAAGTTGATGTTTGAGAAGTATACGTGGAACATCACCAACTTCTCTAAAGTTTTTTCCTTTGAACTTTTCTCCGACAAATTTATACTCGATGGCCACACATGGCAGATTGTTATCACCCCAATTGGGAGCATGGACGATTACATTGATATTTATTTAGAAGCAGATAAGGATTGTGCTAATGTACCTGAGGGCTGGAAAAAGGCTGCAAATTTCAGTTTTGCTGTAACCGACCAGGTTAATGACAAAATGACTATAAGAAAAGGATTTGAATTTGAGTATAGTGCAAATGACTATAGTTGGGGTATTGATGATTTCTTACCTTTACAGGAACTTAAAAACCCTGGTAGCGGGTTTATTGTGAATGATACTTGTGTGATTGAAGCTGGGATTTTTTTCACCAAGTATGTGGATGAGAATAGTGAATATCAGCCTGTTTGCAAGATTGATGACAACCCTACGAGGGACCGCAATAATCCTTTATTTCATAAAATGTTCAGAAGCTCATATGAAAATGTGGATCAAAAGTTTGTTCCACTATTAGTAGAAGCATGTTTACAGCATCCCTCACTTGTTGTAAGTCAGGAGAAGAGAAGTTGCAGGTTTACTGAATGGGCATTCTCAGCTTTGGGTCGAGTTCTTCATTTCCTCAAGACTAAAACAGTGAAAGATATAGATGATGAAGCATGTAATCATCTTCAAATTTTGTGGGATGAACTTAAGACATTTGGGTTTGATTTGACTTGGTTAGAATTTTATGTTGAATCTGCCTTGGGTGCGAAAGATTATATGGAGAATATTGATGAGATGAGAAAGAATGTGTCTGCTTTAAAGATTGAAACAGAGAAGTTGAAGGCAAGGTTGATTGAAAGAGAGACAAAACTTGAAATGTCAAGTAAGGAGTTGATGAAAGCAGAGAAAATATGTGAAAACTCAATTTGGATGTCAAAATCAGGATATTGA 984 0.3648 MGNSKKRLKLMFEKYTWNITNFSKVFSFELFSDKFILDGHTWQIVITPIGSMDDYIDIYLEADKDCANVPEGWKKAANFSFAVTDQVNDKMTIRKGFEFEYSANDYSWGIDDFLPLQELKNPGSGFIVNDTCVIEAGIFFTKYVDENSEYQPVCKIDDNPTRDRNNPLFHKMFRSSYENVDQKFVPLLVEACLQHPSLVVSQEKRSCRFTEWAFSALGRVLHFLKTKTVKDIDDEACNHLQILWDELKTFGFDLTWLEFYVESALGAKDYMENIDEMRKNVSALKIETEKLKARLIERETKLEMSSKELMKAEKICENSIWMSKSGY* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1021 327 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 312 - -
Pvu10g1021 327 Coils Coil 267 294 - -
Pvu10g1021 327 SUPERFAMILY TRAF domain-like 14 142 - -
Pvu10g1021 327 ProSiteProfiles MATH/TRAF domain profile. 12 138 IPR002083 GO:0005515
Pvu10g1021 327 SMART math_3 17 119 IPR002083 GO:0005515
Pvu10g1021 327 CDD MATH 14 138 IPR002083 GO:0005515
Pvu10g1021 327 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 12 151 IPR008974 GO:0005515
Pvu10g1021 327 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1021 Pvu-Chr10 35184323 35185624 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1021 - - pvu:PHAVU_010G098000g 675.241