Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1020 ATGGGGAATAACAAGAAAAGGCTTAAGTTGATGTTTGAGAAGTATACTTGGAACATCACCAACTTCTCTAAAGTTTTTTCCTTTCAACTTTTCTCCGACAAATTTATACTCGATGGCCAGACATGGCAGATTTTTATCACCCTAATTCCGAGCAAGGACGATTACTTGGAAATTTATTTAAAAGCAGATACGGAATCTTCTAATTTACGTGTGGGCTGGGAAAAAGCTGCAAATTTCAGATTTGCTGTAATCAACCAGGTTAATGACAAAATGACTATAAGAAAAGGATATGATTATGCATCTGGCAATAGTTGTTTCGGTCATATCTCATCTTCACATGGACTTAAAGACCCTGGTAGTGGATTTATTGTGAATGATACTTGTGTGATTGAAGTTGGGACTTTTGTCACCAAATATGTGGATGAGAATAAAGAATATCAGCCTGTTTGCAAGATTGATGACAATCCTACGAAGGACAACAATAATCCTTTACTTCATGAAATGTTCAGAAGTTCATATGAAAAAATAGAGGAAGATTTTGTTCCGCTATTAGTAGAAGCATGTTCACAGCATCCCTCACTTGTTGTAAGTCAGGAGAAGAGAAGTTGCAGGTTTACTGAATGGGCATTCACAGCTTTGGGTCGAGTTCTTCATTTCCTCAATACTAAAAAATTAAAAGATATGGATGAAGAAGCATGTAATCATCTCCAAATTTTGTGGGATGAACTTAAGACATGTGGGTTTGATTTGACTTGGTTAGAGTTTTATGTTGAATCTGCGTTGAATGTGAAAGATTATATGGAGAATGTTGATGAGATGAGAAAGAGTTTGTCTGCTTTAAAGATTGAAACAGATAAGTTGAAGGCAAGGTTGATTGAAAGAGAGACACAAACTTGA 897 0.3579 MGNNKKRLKLMFEKYTWNITNFSKVFSFQLFSDKFILDGQTWQIFITLIPSKDDYLEIYLKADTESSNLRVGWEKAANFRFAVINQVNDKMTIRKGYDYASGNSCFGHISSSHGLKDPGSGFIVNDTCVIEVGTFVTKYVDENKEYQPVCKIDDNPTKDNNNPLLHEMFRSSYEKIEEDFVPLLVEACSQHPSLVVSQEKRSCRFTEWAFTALGRVLHFLNTKKLKDMDEEACNHLQILWDELKTCGFDLTWLEFYVESALNVKDYMENVDEMRKSLSALKIETDKLKARLIERETQT* 299
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1020 298 Coils Coil 263 290 - -
Pvu10g1020 298 ProSiteProfiles MATH/TRAF domain profile. 12 134 IPR002083 GO:0005515
Pvu10g1020 298 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 295 - -
Pvu10g1020 298 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 295 - -
Pvu10g1020 298 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 12 147 IPR008974 GO:0005515
Pvu10g1020 298 CDD MATH 14 132 IPR002083 GO:0005515
Pvu10g1020 298 SUPERFAMILY TRAF domain-like 14 138 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu10g1020 Pvu-Chr10 35177841 35179030 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1020 - - pvu:PHAVU_010G098000g 476.863