Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1019 ATGGGGAACAACAACAAAAGGCTTAAGTTGATGTTTGAGAAGTATACCTGGAACATCACCAACTTCTCTAAAGTTTTTTCCTTTAAACTTTTCTCCGACAAATTTATACTCGATGGCCACACATGGCAGATTGTTATCGACCCAATTTGGGGCATGGCCGAATACTTGCACATTTTTTTAGAACCAGATGAGGGTTGTGCTAATTTACCTGAGGGCTGGAAAAAAACTGCAAATGTCAGTTTTGCTGTAACCAACCAGGTTAATGACAAAATGACTATAAGAAAAGGATTTGAATTTGAGTATAGTGCAAATGACAATTGTTGTGGTGTAAGTTTCTTACCTTTACATGAACTTAAAGACCCTTGTAGTGGGTTTCTTGTGAATGATACTTGTATGATTGAAGTTGGGATTTTTGTCACCAAGTATGTGGATGAGAATAAAGAATATCCGCCTGTTTGCAAGATTGATGACAACCCTACGAACGACAATGATAATCCTTTATTTCATGAAATGTTCAGAAGCTCATATAAAAAAATAGAGCAAAATTTTGTTCCACTGTTAGTAGAAGCATGTTTACAGCATCCCTCACTTGTTGTAAGTCAGGAGAAGAGAAGTTGCAGGTTTACTGAATGGGCATTCACAGCTTTGGATCGAGTTCTTCATTTCCTCAATAATAAAATATTAAAAGATATGGATGAAGAAGCATGTAATCATCTCCAAATTTTGTGGGATGAACTTAAGACATTTGGGTTTGTTTTGACTTGGTTAGAGTTTTATGTTGAATCTGCTTTGGATGTGAAAAAATATATGGAGGATGTTGATGAGATGATAAAGAATGTGTTTGCTTTAAAGATTGAAGCAGAGAAGTTGAAGGTAAGGATGATTGAAACAGAGACAGAACTTGAAATGTCAAGTAAGGAGTTGATGAAAGCAGAGAAAATAGGTTTTATAAAATGTCAACAAAATTACAATTAA 975 0.3497 MGNNNKRLKLMFEKYTWNITNFSKVFSFKLFSDKFILDGHTWQIVIDPIWGMAEYLHIFLEPDEGCANLPEGWKKTANVSFAVTNQVNDKMTIRKGFEFEYSANDNCCGVSFLPLHELKDPCSGFLVNDTCMIEVGIFVTKYVDENKEYPPVCKIDDNPTNDNDNPLFHEMFRSSYKKIEQNFVPLLVEACLQHPSLVVSQEKRSCRFTEWAFTALDRVLHFLNNKILKDMDEEACNHLQILWDELKTFGFVLTWLEFYVESALDVKKYMEDVDEMIKNVFALKIEAEKLKVRMIETETELEMSSKELMKAEKIGFIKCQQNYN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1019 324 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 12 149 IPR008974 GO:0005515
Pvu10g1019 324 ProSiteProfiles MATH/TRAF domain profile. 12 137 IPR002083 GO:0005515
Pvu10g1019 324 Coils Coil 287 307 - -
Pvu10g1019 324 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 311 - -
Pvu10g1019 324 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 311 - -
Pvu10g1019 324 CDD MATH 14 137 IPR002083 GO:0005515
Pvu10g1019 324 SUPERFAMILY TRAF domain-like 14 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1019 Pvu-Chr10 35167585 35169231 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1019 - - pvu:PHAVU_010G098000g 515.768