Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1013 CCCACACAGAAACAAACCTTAATCATAACAACCTACGTACAAGTGTTCCATGTTTTTCTGTTCTGCCACTTCATCTTCTTCATCTTCTTCTTCTTCACAGACTCAATGTACCACCAACCCAGAACCCAACAACCCAAACCCACAACCTTCTTCTCTTCTCTCTTCTGTCCAAAATGCCCTCTCAACCACAATCTCCTTCTTGTCCCTTCCAAGCCCAACAAAAAGCCCACCATCTCGGCCTCCCTGCCTCCCGGGCCCACCTCCGGGCCCGCCCAGGCCCTAATCTCCCTCCTCCGCTCCATTCCGGACTGGGCCGACACGGTGCAGGAGCGCGGCATGCAGAAGAAGCGCTCCCTCTACACCCACCCCAACTGGCGCGACCACCGCAGCTCCCTCCGCCACCTCCGTCACCTCGTCTCCAGCCTCTCCTCCCGCGTCATCCTCTCCCTCGTCCCCCCCGTACTCTTCTTCACCGCCTTCGCCGCCGCCATCGCCTCCTACAACCAAGCCCTAATCCTCCACATCCTCCCCGACTTTCTCCCCCTCCTCCACTCCTCCTCCCTCCCCTACCAGCTCACCGCCCCTGCACTCGCCCTCCTCCTCGTCTTCCGCACCGAAGCCTCCTACGCCCGCTTCGTCGAGGGCAAGAAGGCCTGGACCAACGTCATCGCCGGAACCCACGATTTCGCCAGGCAAGCCGCCGCCTTCCTGGACGACGTCGATAACGTCGAGTTCTCCGTCAAGCACGCGCTCTTGAAGTACATCATCGCCTTCCCCATTGCGCTTAAGTGCTACGTGCTGTATGGTTCGGATATTAGGAGAGATCTTCAGCATTTGCTGGAAGTGGAAGATCTAGCAGTGGTCATGAATTCGAAGCACCAGCCTCGATGCATTATTGAGTTTATATCGCAGACCATTCGGTTGTTGAAATTGGAGGAGTCTAGAAGAAATGTCCTGGAATCAAAGATCTCTTCTTTCCATGAAGGAATTGGCATATGTGAACAACTTATGGGCATTCCCATTCCATTATCATATACTCGCTTGACGTCAAGGTTTCTTGTCCTGTGGCATCTGACACTTCCTATCATACTTTGGGACGATTGTCATTGGATTGTGGTTCCTGCAACCTTTATTAGCGCCGCCTCTTTGTTTTGCATTGAAGAAGTTGGAGTTCTCATTGAGGAGCCATTTCCAATGCTTGCACTTGATGAACTATGCCAAAAAGCACAGAATGACATCCAAGAAGCAATTGCAACCGGAAATTTAATTCAAGCACGCTTTGTTGCAAAGCAAAATAGCCACTCTGAAGAGCATTCACCAAATGGCTGGCCCAACTCCTAA 1341 0.5272 PTQKQTLIITTYVQVFHVFLFCHFIFFIFFFFTDSMYHQPRTQQPKPTTFFSSLFCPKCPLNHNLLLVPSKPNKKPTISASLPPGPTSGPAQALISLLRSIPDWADTVQERGMQKKRSLYTHPNWRDHRSSLRHLRHLVSSLSSRVILSLVPPVLFFTAFAAAIASYNQALILHILPDFLPLLHSSSLPYQLTAPALALLLVFRTEASYARFVEGKKAWTNVIAGTHDFARQAAAFLDDVDNVEFSVKHALLKYIIAFPIALKCYVLYGSDIRRDLQHLLEVEDLAVVMNSKHQPRCIIEFISQTIRLLKLEESRRNVLESKISSFHEGIGICEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCQKAQNDIQEAIATGNLIQARFVAKQNSHSEEHSPNGWPNS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1013 446 PANTHER UPF0187 PROTEIN YNEE 52 443 IPR044669 -
Pvu10g1013 446 Coils Coil 399 419 - -
Pvu10g1013 446 Pfam Bestrophin, RFP-TM, chloride channel 128 406 IPR021134 GO:0005254
Pvu10g1013 446 PANTHER BESTROPHIN/UPF0187-RELATED 52 443 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1013 K08994 - gmx:100790216 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1013 10 35087604 35091294 Pvu10g1013 10 35087604 35091294 ECH