Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1009 ATGGGAGTGATGATGAATGAGAGAAAATCAGGAGAGGATAGAATTAGCATGTTATCAGATGATGTACTGTGTCACATCCTTTCATTTCTTACCACCAAGGAAGCCATAGCCACATCCTTGTTGTCTACCAGGTGGAGATTTCTATGGAGCATGCTTCTATTTCTTGACATTCATTGCTCCAAACCAATCATAAAATCCCATGAGACTGTTAAAACATTCTTGGCGCCACGCATAACACAAAGCATCACAAGGTTTCATCTCAAATGTAATAGCCATAGTTGTTGCTCACATTACGTGGAACAATGGGTCTCTGCAGTGATAGCAAGAAAAGTTGAACATGTGGATATCTCCTTATGCATGTGTCACAGAAGCGTGCTCAACTTCGCCACCTTGTTCACCTGTGCCACATTTGTCACTTTGAAGCTCGAGGGTCTCTTCAATCTCTCTATTCCTCTTGATGTTCATCTTCCTAAACTCAAGACTTTGTACCTGCACTTACATGCATTCACCTCCTTCTCCAGCATCAGGAACCTTATCTCTGGATCTCCAGCTCTTAAACTTTTCCACCTGAAGCAGAACTGGTACTTGTCACATTTCAACGAGTTGAAGATTGTGCGAAATTCCCGAGTTATCCAACTCTTCCAACGCAAATGGTTTTACAACCTTGTTATACAAAGTGATCGTAGTTATGATTTTATCTCAGACTACTTGGAAAGTGGTAGTAGGTCAAACATTGTGAAAGCCAAAGTTTATATGACAGTGTATGGTGGCATCAAGGATTTTTACGCTAACCAGTTTGTTTGTGAGACTCTGAAAGAATTAAACAATGTTGAATTTCTGTCTTTGGGTGATTTTAGGGTAGAGACATACCCTTTCAGTCTTGATCTTCCACTGTTTAAGAATCTAGTTGAGCTAAGAGTTTCTCTTAAAAACAGAAACTCCTTGTATATGGAACTTCCTGGGAAGTGTCCTAAGCATGAAATTCTCGAAGTTAATATCATGGATGATCGGTATGATGCTACTCAGAGGTGTAAATATCGTATTAATGGCGGAGTAAGGGAACACGACTTATCAATTGTTCCTTTTTCACCTGAGACAACATTGTTGGAAAGTTGA 1116 0.3987 MGVMMNERKSGEDRISMLSDDVLCHILSFLTTKEAIATSLLSTRWRFLWSMLLFLDIHCSKPIIKSHETVKTFLAPRITQSITRFHLKCNSHSCCSHYVEQWVSAVIARKVEHVDISLCMCHRSVLNFATLFTCATFVTLKLEGLFNLSIPLDVHLPKLKTLYLHLHAFTSFSSIRNLISGSPALKLFHLKQNWYLSHFNELKIVRNSRVIQLFQRKWFYNLVIQSDRSYDFISDYLESGSRSNIVKAKVYMTVYGGIKDFYANQFVCETLKELNNVEFLSLGDFRVETYPFSLDLPLFKNLVELRVSLKNRNSLYMELPGKCPKHEILEVNIMDDRYDATQRCKYRINGGVREHDLSIVPFSPETTLLES* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1009 371 Pfam F-box domain 15 51 IPR001810 GO:0005515
Pvu10g1009 371 SUPERFAMILY F-box domain 8 63 IPR036047 GO:0005515
Pvu10g1009 371 Gene3D - 3 52 - -
Pvu10g1009 371 SUPERFAMILY L domain-like 58 329 - -
Pvu10g1009 371 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 13 336 - -
Pvu10g1009 371 SMART fbox_2 18 58 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1009 Pvu-Chr10 35033657 35034860 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1009 13 186 EF-hand Containing Proteins AT5G41840 33.000 7.24e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1009 - - gmx:102659597 435.647