Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1007 ATGAAGGCTTCTACCTCAATAGCATCCTTGATTTTGCTGCTCATTCTCGTATCAGCAAATTGGTTGTGTTGTGAAGCACAACAGTGTCGTCCCAGTGGCAGAATCACAGGAAAGAAGCCCCCACCAGGAGAATGCAACCAAGAGAATGATTCAGAGTGTTGTGTACAAGGCAAGATGTACACAACGTACAAATGTTCTCCAGCAGTGTCAAGCAACACCGAGGCCCAACTCACTCTCAACAGTTTTGAAAAGGGTGGAGATGGAGGAGGGCCTTCTGCATGTGACAACCAGTATCATTCTGATGACACACCAGTGGTTGCACTTTCCACTGGATGGTTTAACAATAGTAGTAGGTGCCTCCACAACGTTACCATCAGTGCAAATGGCAAAAGTGTTGTGGCCATGGTGGTGGACGAGTGTGACTCTACCATGGGATGTGATGAAGACCATGATTATCAACCCCCTTGTTCCAACAACATTGTTGATGCCTCCAAAGCTGTCTGGAATGCCTTAGGTGTGCCTCACAATCAGTGGGGTGGATTGAAAATTACATGGGCTGATGCTTAA 567 0.4674 MKASTSIASLILLLILVSANWLCCEAQQCRPSGRITGKKPPPGECNQENDSECCVQGKMYTTYKCSPAVSSNTEAQLTLNSFEKGGDGGGPSACDNQYHSDDTPVVALSTGWFNNSSRCLHNVTISANGKSVVAMVVDECDSTMGCDEDHDYQPPCSNNIVDASKAVWNALGVPHNQWGGLKITWADA* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1007 188 Gene3D - 72 187 IPR036908 -
Pvu10g1007 188 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 6 188 IPR039271 -
Pvu10g1007 188 SUPERFAMILY Barwin-like endoglucanases 68 186 IPR036908 -
Pvu10g1007 188 PANTHER LIPID TRANSFER PROTEIN 6 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1007 Pvu-Chr10 35010255 35010998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1007 - - gmx:100785431 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1007 10 35010255 35010998 Pvu10g1007 10 35010255 35010998 ECH
Pvu8g0671 8 5998043 5998609 Pvu10g1007 10 35010255 35010998 PCT