Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1006 ATGACGGAAGAAGGAGAAGATAGAATCAGCAAGCTGTCAGACGATGTTCTGTGTCACATCCTTTCCTTCCTTACAACGAAGGAAGCCATTGTTACATCATTGTTGTCAACCAGATGGAGTCTTCTATGTTCCATGCTTCCATCTCTCCACATCAACTGCTCCAAACGAATCATCCAACACTACTCCTCCGATGTTGATATCTTCGTGGCCAAACACACACAGCAAAACATGAGAGACTTTCATCTCCACTTCGTAGCAAAGAAAGTTCAAAACATCGATATCTCCTTCTGCCACTACGAGGAAATCTATCTATACTTCAATACCTTGTTCACTTCCTCCACACTTGTCACCTTGAATATCACAGGCTCCTTGAATCTCGAACTTCCTCCTTCTATTCATCTCCCTAATCTCAACACCCTCAATCTACGTGTCCGCTCTTGCTTACCCCTCTCTAATCTTTCCAAGCTTATATCCGAATCTCCGGCTCTTAAACTCTTTTATCACCGGCCAAAGTGTTTCGGCTATCACTTGGATGAGATGAAGATGCTGTTTAACCCTGGACAAATCCAAGTGTTCTATCGGAACTGCCACTGCAACCTCTTCATAGAAAGTGATGGTGATTATGATTTCATATCACATGTTCTGGCGCTAGGAACATGGCCAAAGATTGTGAGAGTGAAGGCTTATTTGATAGTGCGGTTTGAAGACACAGATATTGTTTACAGGATCCTTGGAGGACTACGTAACGTTGAGTGTCTGTATATCAAGTATTTTAGGGATACAGTGACGCCTTCTCATCCTCTCCCACAGTTCAACAATTTAGTTGAGCTTCGTCTTCTTCTTAGAAGGAATGACTCCCTCTTTCAGGAGTTTCCCACAAAGTGTCCTAAGCTTAAAGTTCTTGAATTCAATATCATGGACCATCTCTCTTGCATCACTGAAAGATATCGATTCAATGTCAGAGATGGAGTCAGGAAGAACGACCTTTCAATTGTTCGTTTTCAACCTCGTTTTCCTCAACCTCCAACACTGCCACTTTAG 1041 0.4256 MTEEGEDRISKLSDDVLCHILSFLTTKEAIVTSLLSTRWSLLCSMLPSLHINCSKRIIQHYSSDVDIFVAKHTQQNMRDFHLHFVAKKVQNIDISFCHYEEIYLYFNTLFTSSTLVTLNITGSLNLELPPSIHLPNLNTLNLRVRSCLPLSNLSKLISESPALKLFYHRPKCFGYHLDEMKMLFNPGQIQVFYRNCHCNLFIESDGDYDFISHVLALGTWPKIVRVKAYLIVRFEDTDIVYRILGGLRNVECLYIKYFRDTVTPSHPLPQFNNLVELRLLLRRNDSLFQEFPTKCPKLKVLEFNIMDHLSCITERYRFNVRDGVRKNDLSIVRFQPRFPQPPTLPL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1006 346 Gene3D - 6 51 - -
Pvu10g1006 346 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 7 166 - -
Pvu10g1006 346 Pfam F-box domain 9 45 IPR001810 GO:0005515
Pvu10g1006 346 SUPERFAMILY F-box domain 5 57 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1006 Pvu-Chr10 35006870 35007964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1006 7 164 EF-hand Containing Proteins AT5G41840 29.082 1.57e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1006 - - vun:114165572 374.785