Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0995 ATGGCAGAAGCAACAAAAGGGTATGCTGTTGTCACAGGAGCAAACAAGGGAATTGGATTTGCAATATGCAAGCAATTGGCTTCAAATGGGGTCAGTGTGGTGCTCACAGCCAGAGATGAGAAGAGGGGTGTTGAAGCTGTTGAGAAACTCAAAGAGCTTGGTCACCCTGTAGTTTTTCATCAACTTGATGTTACAGATCCAAAAAGTATAACATCGCTGGCAGATTTCATCAGGAACCAATTCGGCAAACTGGATATCTTGGTAAACAATGCTGCAATTCCTGGGGCACATGTGAACGGTGAGGCTATGGCTGCTGCTGGCATTGTGGAAAATGCTGGTCGTGCTGATTGGAGTAAAATAGTAACTGAAACCTATGAATTAGCTGAAGCAGGTCTTAAAACAAACTACTATGGAGTCAAGGAATTAACCAAAGCACTTATTCCCCTTCTCCAGTTTTCAAGCTCCCCAAAAATTGTCAATGTTTCATCATCCATGGGAAGGCTTGAGCATATGAGGAATGGGTGGCCTAAAGAAGTGTTCAATGATGTTGAAAACCTTACAGAAGCCAAGATTGATGACATTTTGGATGAATTTCTAAAGGACTTTAAAGAGGGTTCTCTAGATACCAAAGGCTGGCTTCTTGCTATGTCTGCATACAGTGTCTCAAAAGCTTCTCTTAATGCTTACACAAGGATTCTGGCCAAGAAGTATCCCTCATTCTGCATCAATGCTGTTTGTCCAGGCTATGTGAAAACAGATATAAACTGCAATACAGGTTTTCTCACACCAGATGAAGGTGCTGAAGCTGCAGTGAGATTGGCACTGCTACCTGAGGGAAGCCCTTCTGGCCTCTTTTTCTCTAGAAGTGAAGAGAAACCATTTTGA 885 0.4271 MAEATKGYAVVTGANKGIGFAICKQLASNGVSVVLTARDEKRGVEAVEKLKELGHPVVFHQLDVTDPKSITSLADFIRNQFGKLDILVNNAAIPGAHVNGEAMAAAGIVENAGRADWSKIVTETYELAEAGLKTNYYGVKELTKALIPLLQFSSSPKIVNVSSSMGRLEHMRNGWPKEVFNDVENLTEAKIDDILDEFLKDFKEGSLDTKGWLLAMSAYSVSKASLNAYTRILAKKYPSFCINAVCPGYVKTDINCNTGFLTPDEGAEAAVRLALLPEGSPSGLFFSRSEEKPF* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0995 294 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 280 IPR036291 -
Pvu10g0995 294 CDD carb_red_PTCR-like_SDR_c 8 294 IPR045313 GO:0016616
Pvu10g0995 294 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Pvu10g0995 294 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Pvu10g0995 294 PRINTS Glucose/ribitol dehydrogenase family signature 150 166 IPR002347 -
Pvu10g0995 294 PRINTS Glucose/ribitol dehydrogenase family signature 219 238 IPR002347 -
Pvu10g0995 294 PRINTS Glucose/ribitol dehydrogenase family signature 238 255 IPR002347 -
Pvu10g0995 294 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 206 234 IPR020904 GO:0016491
Pvu10g0995 294 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 294 - -
Pvu10g0995 294 Gene3D - 2 294 - -
Pvu10g0995 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Pvu10g0995 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 164 IPR002347 -
Pvu10g0995 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 219 238 IPR002347 -
Pvu10g0995 294 Pfam short chain dehydrogenase 9 168 IPR002347 -
Pvu10g0995 294 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0995 Pvu-Chr10 34820443 34822656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0995 9 271 Miscellaneous Gene Families AT2G29150 26.692 1.20e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0995 K15095 - gmx:100803877 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0995 10 34820443 34822656 Pvu10g0995 10 34820443 34822656 ECH