Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0991 ATGGCTTCACCACTTTCCTTGCTGATCCTCTTCCTTGTGTTCATCTCTGCATCACATTCGAATGCATACCCTTTATCAACGCAGAACAGATGGATCATAGATGAAGCCACAGGACAACGTGCGAAGTTGGTGTGTGCCAATTGGGCTGGCCACCTCAAACCGATGATCCCTGAGGGTCTTGACAAACGGCCATTGAAGGAGCTGGTTGGTGAGCTTGTGAAGCACAACTTCAACTGCGTGCGTCTCACCTATGCAATCTACATGTGGACACGCTATAGCCATGAAAATGTGAGTGCCTCCTTTGCCTCTTTGGATGCACCAGAAGTGGTCCAAGGCATTTCCAAGAACAACCCTTCTGTGTTGTCCATGACACATGTTCAGGCCTTTCATGCAGTCGTTCATGAACTTGGGGTTCAGAATGTGAAAGTGCTGCTTGATAACCATGTGAGTGAGCCAATGTGGTGCTGTGATGATGATGATGAGAATGGCTTCTTCCATGATAGACATTTCAATCCTCAGGAATGGGTTCGTGGCCTTACTTTGGCAGCCAAACACTTCACTGGAAACCATGCTGTTGTGGCAATGAGTTTGAGGAATGAGCTGCATGGTCCTCGCCAGAACTTGCAGGATTGGTACAGGTACATGAGCCAAGGAGCAGTAGCTATTCACAAGACAAATCCAAATGTGCTTGTGCTTATCTCAGGTTTGAACTATGACACTGAGTTGCAGTTCTTGAAGAGTAAACCATTGAAGATAGACTTGGGTAAGAAAATGGTGTACGAGACACATTTGTACTCATGGTCTGGAATTGGGACACTGAAATTGAAAGAGATATGGACAAAGCAACCATTGAATAGGATATGTGCCAACAACATTAAAGGGATAGACTACAGAGTTGGATTCCTTACCACTGGCAAGAATGCAGCTCCTTTGATTTTTACTGAGTTTGGGTTTAACGAGGAAGGTTCTTCAGTGGAAGACAGCAGGTTCTTGACATGCCTTCAAACCTATCTTCTTGGAAAAGATTTGGACTGGGGATTGTGGGCTTTTCAGGGTAGCTACTATGTGAAGAAAGACCAGGTCCAAGTTGATGAGTCATTTGGTCTCATGGATGAAACTTGGCATCACCTTAGATATCCCAACCTCACTCACAAGTTCCAGCTTTTGCAAAGGAAGAATATAGTGAATGAGAAGAATGAAGTTGAACTTGGAAGCTGTGAGACCAAAAACAGATGGGTTGGTGGAGAGAATGGGACTAAAATCATTTTACATGGCACTAAGAAGTGCTTAACAGCAGCTGGTGAAGGGCTTCCAGTTGTAGTTTCTGATTGTGAAAGGAAGAGCAGTTCTTGGAAATCTGTATCACTGTCTAAACTTCACTTGGCTACTATGAATCAACAGGAGGAACAACTTTGCTTGCAGAAGGATTCTAACTCATCCAGCATCGTGACTTCAAAGTGTATCTGCATAAAAGATGATTCTCTATGTCTTGATGATCCTCAAAGCCAGTGGTTCCAGCTTGTTGAGACCAATGTGTAG 1539 0.4418 MASPLSLLILFLVFISASHSNAYPLSTQNRWIIDEATGQRAKLVCANWAGHLKPMIPEGLDKRPLKELVGELVKHNFNCVRLTYAIYMWTRYSHENVSASFASLDAPEVVQGISKNNPSVLSMTHVQAFHAVVHELGVQNVKVLLDNHVSEPMWCCDDDDENGFFHDRHFNPQEWVRGLTLAAKHFTGNHAVVAMSLRNELHGPRQNLQDWYRYMSQGAVAIHKTNPNVLVLISGLNYDTELQFLKSKPLKIDLGKKMVYETHLYSWSGIGTLKLKEIWTKQPLNRICANNIKGIDYRVGFLTTGKNAAPLIFTEFGFNEEGSSVEDSRFLTCLQTYLLGKDLDWGLWAFQGSYYVKKDQVQVDESFGLMDETWHHLRYPNLTHKFQLLQRKNIVNEKNEVELGSCETKNRWVGGENGTKIILHGTKKCLTAAGEGLPVVVSDCERKSSSWKSVSLSKLHLATMNQQEEQLCLQKDSNSSSIVTSKCICIKDDSLCLDDPQSQWFQLVETNV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0991 512 Gene3D Glycosidases 22 391 - -
Pvu10g0991 512 Pfam Cellulase (glycosyl hydrolase family 5) 64 349 IPR001547 GO:0004553|GO:0071704
Pvu10g0991 512 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS HYDROLASE 6 512 - -
Pvu10g0991 512 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 6 512 - -
Pvu10g0991 512 SUPERFAMILY (Trans)glycosidases 22 377 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0991 Pvu-Chr10 34718200 34719972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0991 22 509 Glycoside Hydrolase AT1G13130 36.750 4.13e-123 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0991 K01179 - egr:104441706 516.924