Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0964 ATGGACGCGCTACGGGCCGAAAGCCCGGCCCGCCAGAGGCCCAATGCCTACTCACTCTCTGCATACATTTCCATTTCATCCTGTAACACCACACACACTCCAACAATGGCGGATGCACTTCCGCTCTCTCACGCCACCCAACAATTGAAGCAAATCGCCATCGACTACACTCCCGAGGCCTGTTCCCACTGTGCCATCTCCGACACCATCACCCTCACCTACGACATCCGCGGCGGCGCGCGGTGGCGCACGCCCACCCGCTTCCACTCGGGCTTCTTCTCCGCCCTCATCAAGTGCCCCGAGGGCGACACCAACGGTCTCAATTTCAACCTCTACCTCTCCTCCCAGGAGGGCGACAAGTCCCAGGACGAGATCGACTTCGAGTTTCTGGGCCGCGACAGGACCCTCGTACAAACAAACTTCTTCTCTGGGGGCGCGGGGAACAACGAAAGGATCCACCATCTGGGGTTCGACGCCTCCGAGGGGTTCCACGAGTACGCAATCGCGTGGGGGAGGCAGACGATCGAGTGGCGCGTGGATGGAGAGGTGGTTAGGAGGGAGGAGAGGAAGGAGGGAGAAGGGTTCCCTGAGAAAGCTATGTTTTTGTACGCTTCGATTTGGAATGCTAGTGGGATCAGCGATGGGAAGTGGTGTGGGAAGTACTGTGGGGCTGATGAGCCTTATGTTTGTGTATATAAGGACATTCGTGTTCCTGTTGCCACTGCTGTTGACCATGAGTGA 741 0.5776 MDALRAESPARQRPNAYSLSAYISISSCNTTHTPTMADALPLSHATQQLKQIAIDYTPEACSHCAISDTITLTYDIRGGARWRTPTRFHSGFFSALIKCPEGDTNGLNFNLYLSSQEGDKSQDEIDFEFLGRDRTLVQTNFFSGGAGNNERIHHLGFDASEGFHEYAIAWGRQTIEWRVDGEVVRREERKEGEGFPEKAMFLYASIWNASGISDGKWCGKYCGADEPYVCVYKDIRVPVATAVDHE* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0964 246 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 6 243 IPR000757 GO:0004553|GO:0005975
Pvu10g0964 246 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 41 241 IPR044791 GO:0004553
Pvu10g0964 246 PRINTS Glycosyl hydrolase family 16 signature 80 98 IPR008264 GO:0004553|GO:0005975
Pvu10g0964 246 PRINTS Glycosyl hydrolase family 16 signature 121 136 IPR008264 GO:0004553|GO:0005975
Pvu10g0964 246 PRINTS Glycosyl hydrolase family 16 signature 137 150 IPR008264 GO:0004553|GO:0005975
Pvu10g0964 246 PRINTS Glycosyl hydrolase family 16 signature 155 172 IPR008264 GO:0004553|GO:0005975
Pvu10g0964 246 PRINTS Glycosyl hydrolase family 16 signature 175 192 IPR008264 GO:0004553|GO:0005975
Pvu10g0964 246 SUPERFAMILY Concanavalin A-like lectins/glucanases 79 225 IPR013320 -
Pvu10g0964 246 Pfam Glycosyl hydrolases family 16 66 210 IPR000757 GO:0004553|GO:0005975
Pvu10g0964 246 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Pvu10g0964 246 PANTHER GLYCOSYL HYDROLASES FAMILY 16 PROTEIN, EXPRESSED 41 241 - -
Pvu10g0964 246 Gene3D - 39 244 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0964 68 242 Glycoside Hydrolase AT3G44990 35.484 1.37e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0964 - - pvu:PHAVU_010G092400g 477.633