Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0960 ATGAAGAGTTTGCGTGAGATATGGAATTCAAAAGTCCCTTCAGAATCCTTTAGCAAGCTAGACACACTAATCATTGAGAAGTGCGATAAATTAGTCAGTGTTTTTCCTTGTTACAATGAGGGAATATTTCACAGTCTATGCAGCCTGACTGTTAAAGAGTGCAGGTTAATGGTAACAATATTTGACATAGATAATAAAAAAAATGATGTTGGGGATGTAACTAGCTTGCAAGATGTTCATTTGGAAATACTCCCAAATTTGAAGCATGTATGGAAATTGAAAGAAGGTCGAGGAGGGATTCTTAACTTGAACAATCTGCGAAAGATAATGGTCCAAGATTGTTTCTGCTTAGAAGACTTATTTCCATTTTCTGTAGCTAAGAGTCTTGGTAATCTTGAATTCCTTGTGGTGAGTTCTTGTTATGAATTGAGGGAAATTGTGAACAAAAGAGCAGCTGCCAACACTGCTAATTTATCATTGAAGTTCCCTAACCTAAGAAGCATCAAATTTTCAGTCCTACCACACCTTACAAGTTTCTATCCAGGAGCTTTTCAACTGTCTTGTCCAACGTTGAATGACCTATCTATTGAAAATTGTTACTGGCTGGAACCATTCCACAAAGAAACTGTTGATGCACAAGAAAAGTCTGTCCTCTTTCCTGAAGAGGTACTCAATAAGTTGAAGTCCATGCAAATTGAGTCTTGGCATGCAGAGTCACCAAACAGTTGTATGGGTGAAGGGAATCATCGAAGAAATAGTTTAGAAGAGCTTTGTTTATCTGAATTAATGGATACTGAGATCTTATATTCTTTTCTCCATAGCAATCCTAATCTGGAAAGCCTGTCCTTGAGTGATTGTTTGTTTAAAAAGATACTGCCTCTTGAAAAACATACAAAAATTGAAACACTGGGAGTAGTTCCAAAGCTGAAAAGCTTAAAGTTGATAAACTTAAGTAATCTTACAGATCTAGGCTTTGAACAAGACATAATTCTTAAAAGGTTAAAACTCTTGCTTTTGAAAAAATGTCCTCGCCTGAAAACAGTAGTGTCTTCTTCGGCATCTCTCAGTAACTTGGTGACTCTTGAAGTGGATAATTGTGATGGATTAGTAAAGCTAATGTCACAATCTACTGCAGAAAGCTTGGGTCAACTCAACACCATGAAGGTAACCAAATGTAGTTCTCTGAAGGAAATTGTAGGAAAAGATGCAGAGAATGCTGATAAAGTTGTTTTTAAACAATTGAAGAGCCTGGAGCTTGTTTCTCTGAAGAACCTCCAGAGTTTTTGTAGCTCTGATAGTTGTGAATTTGAGTTCCCTTCATTGGAAAAACTAGTGGTGAGTTCATGTTATAATATGAGAAAATTTTCTGACAAAGTCACAAGCCGTAGCACACCCATTTTACAAAATATATATGTGGTACCTGAAAAAGAGAAGAAAAGATATTGCTGGGAAGGTGATTTAAATGCTACAATACAAAAAATATTTCAGGATAAGAAATTTTTTGAAGGCATGGACATGATGAGTTTCTCTGATCACCCAGAGCTACAAAAAGCCTGGCAAGGTGATAAATTGGAGAACTGTGAAATTCAACCATGTGCAATTCCATCTAATATTCTTCCTTATTTGAAATGCTTAAATGAGCTGTTTGTGCAAGATTGCAACAAGGTAAAGGTAGTTTTTGAGATGAATGTCACAGAGGGAACAGGAGCGACATTCCAATTGCAGAAATTAACTCTAGGCAACCTATCAGAGCTTAAGAATGTGTGGGAAAGGAATGGTGAAGGAACTCATAGCTTTCAAAATCTGCAAGAAGTATCTGTTCAAGACTGTGACATGCTGCAAACTGTGTTTCCTGCAGCCCTTGTAAAAAATCTACAAAGCTTTACAAACTTGAAATTGAATCTAAATGTGCCAAATTTAGAAGGAATGACTATAAGTTATTGTCATTGCCTAGAGGCATTCCGCACTCAAATTACTGAAATTGGTCAAAACAGGAAGCGTACAGACTTGAAAACTTTGGATCTGACAGATGTATGGGAGCTCAAATCTATTGGATCAGGGGATGTTCCATGGTTAGACATGATTTGTAAGAAGCTCCGTGAATTATATGTTTCATATTGTCCTCATTTCAAGGAATTAATGTCTTCCTCTTCTGCAGTATCTTTCTCCTTTTTGAAACAATTGTATGTGTTCAATTGTCAAAGATTGGAGTATTTATTCACATCCTCGGCAGCAAAAGAGTTAACTCAGCTTGAGCGTATCCATCTCTACCAATGTAGATCACTAGAAGAAATAGTGGCACCGCAAGTTGAAACAACTTCAGAGATCAAATTGCAGAAGCTATACCACATAGTTTTATATGATTTATCAAGCTTGAAATGTTTTTATTCTGGAAATAACACTTTGCAGTTACCCTCTTTGCTAGAAATTGAAATAAATAAGTGCCCCAAGATGGAAATTTTCTCTCAAGGATCAATAGGACCTAATTCTTGTAGAAAAATTACAACTTCCGCTAAGTTAAATGATGGATCGGTCATCGTGCATGATGATCTTAACTCGACTGTCAAAAAGGTGTTTTGGCAACAGAATCATATAGTTTTCGGGAAGTCTCATATGTTGCAAGAGATATGGAAATCAGAGACACTCCCAGAAGGGTATTTGCACAATTTAACTTCTATGGTAGTGGAAGATTGTGATTTTTTATCTGATGCAATACTTCCTTCCCATTTACTTCATTTGCTAAGTAACTTGAAAAAGTTGCAAGTGCGGAGATGTAATTCTCTAAAGGCAGTATTTAGTCATACGAAGATCACTAATATGGGACCTCAAGGAAGTCTCACCCATCTGAAAGAACTTCATGTGGAAAACTGTGAAGAGTTAGTGGCAATTCTTGCAAAGGGTGAAGCAGAAACTGATGAAGCTACTAAAGAGATTGCTATGTTCTCCAGCATAACCTTGTTGAGGCTATCGAATTTGCCAAACCTAAGGTGCATATATCCTGGAATGCACATATTAAAGTGGGGTATGTTAAAAGAGTTGCATGTCAGACATTGTCAAAAGCTGAAGTTTTTTGCAACAGAATATCAGAACTATACAGGTTTAAATCAAGATGATTTTTCAACAGATAAGCAAGCAGTTGTCTCTCTTGAAAAGGTTACTCCCTGCATGGAGGTAATGTCGCTAGGTAAGGAAGAAGCTGTGATGATTTTGCAAGGAAAACTTCATATTGAGCTCCCCAAATTAAGCTCTCTCATATTGCAGTGCTTTCACGATGAACAAGGGGATGTATATCCATTTGTTTTTGGTTCGAAGGTGTCAGTGTCACTCCCCCCCACTATCGAAAAGCTTGGGTTGCTTCATTGTGCCTTCAAAGAGATATTCCCCGCTCAAGCACCAGGCATAGATTGTACTAAAATACTTTCACAGCTTAAAACATTGGAGCTTCTGAGTCTCTTCCAACTTAAATCCATAGGATTAGGGCACTCCTGGGTAATCCCCTTACTACAAAATTTAAATACCTTACATGTCTGGGACTGCCATTGTTTGACAAACTTGACACCATCCACTGTGTCTTTCTCAAATCTGATAAAGCTTAATGTAAAGAATTGTCGGAAGTTGAAATACTTGTTCACATTTTCAACGGCCAAAACATTGGTTGTACTGAAGGAGGTTTGCGTAACCAATTGTAAATCGCTAGAAACGATAGTGGCTGATACAGATGGAGATGACCTGAATGAAGACAATGAGGTGGAGGAGGAAGGACAAGGGGAAGGTAATGAAGATGATGTAGAGGAGGAGGGACAAGGTGAAAGTGAAGATGAAGACGATGAAGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAAGGTGATGGTGATGGAGATGAAGATGAAAATGAAGGTGACAGAGATGAAGATGATGGTGTGAAGGAGGAGGAGGGACAAGGTGGTGGTGAACTCCACGAAGATAAGAATAAAGATGAAGATAAAGCTAATGCTAATGCTGAAGTTGATGGAGATGAAGATGAAAATGAAGGTGGCGGTGATGAAGATAATGATGTGGAGGAGGAGGAGGAGAAACATGGTGAAGGTGAAAACGACAAAGATAAAGATAAAGATGATGCTGAAGGTGATGGAGACAAAGATGAAAATAAAGGTGACAATAACGAAGATGGTGGTGTAGAGGAGGAGGAGGGACAAGGTGAAGGTGAAGACGACCAAGATGAAGATAAAGATAAAGAAGAAGACGAAGATAAAGATAAAGATGAAGTTAAAGCTTATGCTAAAGGTGTAGGTGAAGGTGATGAAGATAGAAATGAAAATGCAGGTGAATGTAATAACGGTGGAAATGAATGTGAAGATGAGATTACATTCAAGAAGCTTGAGATTTTGACTCTTAAATCATTACCAAAACTTCGAAGCTTTTACAGTGGGAGTTCCACTTTGAATTTTCTGTCCTTGGAAGAAATGTCGTTAAGAAAATGCTGCACTGGGAAACTTTTCCGGTTTGGTGACAAAGTTCCAGAGAAATTAAGAGTGGAAATAGATGAGTGTAACCGTGATATGAATTCTGTGTTCATGCAACAAGACGAGGCAGAGGCATCCTGA 4617 0.3784 MKSLREIWNSKVPSESFSKLDTLIIEKCDKLVSVFPCYNEGIFHSLCSLTVKECRLMVTIFDIDNKKNDVGDVTSLQDVHLEILPNLKHVWKLKEGRGGILNLNNLRKIMVQDCFCLEDLFPFSVAKSLGNLEFLVVSSCYELREIVNKRAAANTANLSLKFPNLRSIKFSVLPHLTSFYPGAFQLSCPTLNDLSIENCYWLEPFHKETVDAQEKSVLFPEEVLNKLKSMQIESWHAESPNSCMGEGNHRRNSLEELCLSELMDTEILYSFLHSNPNLESLSLSDCLFKKILPLEKHTKIETLGVVPKLKSLKLINLSNLTDLGFEQDIILKRLKLLLLKKCPRLKTVVSSSASLSNLVTLEVDNCDGLVKLMSQSTAESLGQLNTMKVTKCSSLKEIVGKDAENADKVVFKQLKSLELVSLKNLQSFCSSDSCEFEFPSLEKLVVSSCYNMRKFSDKVTSRSTPILQNIYVVPEKEKKRYCWEGDLNATIQKIFQDKKFFEGMDMMSFSDHPELQKAWQGDKLENCEIQPCAIPSNILPYLKCLNELFVQDCNKVKVVFEMNVTEGTGATFQLQKLTLGNLSELKNVWERNGEGTHSFQNLQEVSVQDCDMLQTVFPAALVKNLQSFTNLKLNLNVPNLEGMTISYCHCLEAFRTQITEIGQNRKRTDLKTLDLTDVWELKSIGSGDVPWLDMICKKLRELYVSYCPHFKELMSSSSAVSFSFLKQLYVFNCQRLEYLFTSSAAKELTQLERIHLYQCRSLEEIVAPQVETTSEIKLQKLYHIVLYDLSSLKCFYSGNNTLQLPSLLEIEINKCPKMEIFSQGSIGPNSCRKITTSAKLNDGSVIVHDDLNSTVKKVFWQQNHIVFGKSHMLQEIWKSETLPEGYLHNLTSMVVEDCDFLSDAILPSHLLHLLSNLKKLQVRRCNSLKAVFSHTKITNMGPQGSLTHLKELHVENCEELVAILAKGEAETDEATKEIAMFSSITLLRLSNLPNLRCIYPGMHILKWGMLKELHVRHCQKLKFFATEYQNYTGLNQDDFSTDKQAVVSLEKVTPCMEVMSLGKEEAVMILQGKLHIELPKLSSLILQCFHDEQGDVYPFVFGSKVSVSLPPTIEKLGLLHCAFKEIFPAQAPGIDCTKILSQLKTLELLSLFQLKSIGLGHSWVIPLLQNLNTLHVWDCHCLTNLTPSTVSFSNLIKLNVKNCRKLKYLFTFSTAKTLVVLKEVCVTNCKSLETIVADTDGDDLNEDNEVEEEGQGEGNEDDVEEEGQGESEDEDDEDDDDDDDDDDDDDDEGDGDGDEDENEGDRDEDDGVKEEEGQGGGELHEDKNKDEDKANANAEVDGDEDENEGGGDEDNDVEEEEEKHGEGENDKDKDKDDAEGDGDKDENKGDNNEDGGVEEEEGQGEGEDDQDEDKDKEEDEDKDKDEVKAYAKGVGEGDEDRNENAGECNNGGNECEDEITFKKLEILTLKSLPKLRSFYSGSSTLNFLSLEEMSLRKCCTGKLFRFGDKVPEKLRVEIDECNRDMNSVFMQQDEAEAS* 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0960 1538 SUPERFAMILY RNI-like 526 766 - -
Pvu10g0960 1538 PANTHER RPP4C3 103 235 - -
Pvu10g0960 1538 PANTHER RPP4C3 710 840 - -
Pvu10g0960 1538 PANTHER RPP4C3 1158 1515 - -
Pvu10g0960 1538 PANTHER RPP4C3 914 1028 - -
Pvu10g0960 1538 PANTHER RPP4C3 337 490 - -
Pvu10g0960 1538 PANTHER - 914 1028 - -
Pvu10g0960 1538 PANTHER - 103 235 - -
Pvu10g0960 1538 PANTHER - 710 840 - -
Pvu10g0960 1538 PANTHER - 1158 1515 - -
Pvu10g0960 1538 PANTHER - 337 490 - -
Pvu10g0960 1538 SUPERFAMILY RNI-like 17 205 - -
Pvu10g0960 1538 MobiDBLite consensus disorder prediction 1239 1315 - -
Pvu10g0960 1538 MobiDBLite consensus disorder prediction 1392 1420 - -
Pvu10g0960 1538 SUPERFAMILY RNI-like 933 1235 - -
Pvu10g0960 1538 MobiDBLite consensus disorder prediction 1421 1445 - -
Pvu10g0960 1538 MobiDBLite consensus disorder prediction 1337 1363 - -
Pvu10g0960 1538 SUPERFAMILY RNI-like 253 452 - -
Pvu10g0960 1538 MobiDBLite consensus disorder prediction 1316 1336 - -
Pvu10g0960 1538 MobiDBLite consensus disorder prediction 1239 1454 - -
Pvu10g0960 1538 Gene3D Ribonuclease Inhibitor 222 648 IPR032675 -
Pvu10g0960 1538 SUPERFAMILY RNI-like 688 957 - -
Pvu10g0960 1538 Gene3D Ribonuclease Inhibitor 1069 1240 IPR032675 -
Pvu10g0960 1538 Gene3D Ribonuclease Inhibitor 665 839 IPR032675 -
Pvu10g0960 1538 Gene3D Ribonuclease Inhibitor 91 218 IPR032675 -
Pvu10g0960 1538 Gene3D Ribonuclease Inhibitor 864 1045 IPR032675 -
Pvu10g0960 1538 MobiDBLite consensus disorder prediction 1364 1391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0960 Pvu-Chr10 33924445 33932822 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0960 - - pvu:PHAVU_010G092000g 2416.73