Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0959 ATGGACTCTCTAATAATAGCTGGTTTTCGTAAGTTCCTGAGGTGGCCTCTTTTAAAGGCATGGCTAAAAGAGCAATTGATTTACCTCACATCGTACGAGACAAGTGTTCATGAACTAAAAGGTGCTGTCGAGAACCTCAAGAATGTGAGAGATGAAATTCTGCACAAAGTTGATGAGGAAGAACAACGACGTGGACGAGAAATTCCTCTTCAAGTGAAAGAATGGATAGAGAGCGTGAACCGACTAATTTCTGAATATGAGGATTTCAATGAGGACACATATCATGAACTTGCGGTGTTTGACTTGTTGAAGAGTGGTTACCTTCCCAAGCCGGGGATAAGGTATCGTCAAAGCAGACAAGCACATGATATTAGACGGAAGGTCAATGGGTTATTGCAGAGTGCAAAGTTTGACACATTTTCTTATTGGTCTGGTCCACCCTCCATGGATGCCTTTTTTTCTAACGTTGGTTATGAAAGCTTTCCATCCAGAGAAGAAACAATGAGAAAGATGATTGCAGAATTGGAAGAGCCAAGTGTTAGAATGATTGGTCTTCATGGGTTAAGTGGCATGGGCAAGACCACTTTAGTCAAAGAGATTGTTAAAGTAGTCTTAGAAGCTAAGAAGATCGATGTAGTGACCATGGCAAGCGTGACAAGAAATCCTGACATCAGAAAAATCCAAGGACAAATTGCTGACACGTTGGGGGTTATATTGGATGAGGAAAGTGACATTGCAAGAGCTGCTAGAATACAAGGGATGTTGAAGAGTGAAAAGAAGAAGACGCTTATAATCCTAGATGATCTTTGGGAAAAAGTGGACTTCAATATGCTTGGGATTCCATATGAAATACATGGTGATAACGGCCTAAAAAATGTTAAAGAAGGAAAATCCCTCCTTGCTGGTAGCTTGATGAATATGAAAGATGGAAAGTCTAAAGAAGCCCGTGGTGCTTCCCCTGAGATGAAAACTGAAGAAACTCGTAGCCAGTACAAAGGGTGCAAAATTTTGATGATTTCTGAAAGCAAAAAAGTATTATTAAGTCAAATGGGAAGGACAGAAAACTGTGTTTTCTCTTTGGAAGTCTTAAAGGAAAAGGAAGCAGAGATGCTGTTCAAGAAAATGGCTGGAATGGGAGACTTTAATTCTGAATTTCAGAAGTTAGGAGCTCAAATTGCCAACAAGTGTAATGGGTTGCCAATGACAATTGTTACAACTGCAAGGGCATTAAAAAATCAGAGCCGCTCTGTATGGGAGGATTCTCTCCGAAGACTTGAATGGCAGAAGTTAACTGGGGCACCTGAGTTTTCAACAAAGTTGAGTTATGATCTTTTAGAAGACGAGGAGCTGAAGTATACTTTCTTACTTTGTGGTCGCATGGGTCATGATGCATTGATTATGGACTTGGTCAAATACTGCATCGGTTTGGGGTTCCTTCAAGGGATCTACACAGTAAGGGAAACCAGAGACAGAGTTTATACCCTGGTTGAAAAGCTAAAAGAATCGGGTTTGTTGTCTGACAGTTATTCACGGGATCAATTTACCATGCAAGATACTATTCGCAGTGCAGCTTTGTCAATAGCAAATAAGGAAAAACATTTATTTACAATGACAAAGGGAAAGATAGATGAATGGCCTGATAAACTGGAAAAGTATGCTGCTATTTCCTTGCATCATTGTGACTTCATTGAGGGGTTTCCTAGGAGAATAAACTATCCGAGACTTAGGGTCTTCCATGTCAACAATAGTGATCCACATCTCAAAATACCCAAAAACTTCTTTAAGGGAATGAAGGAACTCAAAGTGTTGATATTGACCGGCATTCATTTCTCTCTCTTAGATTCGTCCATTTCATCCTTGACAGAACTCAGACTGCTTTGTTTGGAGCACTGCACACTAGACAAGGAATTATCCATCATAGGAGTGCTGAAAAAGTTAAGAATTCTTAGTTTTTCAAGATCTGATATTGAGAAATTGCCGGTTGAATTGCAACAGTTGAAAAAATTACAAATTTTTGACATAAGTAATTGCTCTAAACTTAGAGAAATTCCATCTGGTGTCATATCAAGCTTGGTATGCTTAGAGGAGTTGTATATGAGAAACACCTTGATTCAATGGGAGGAGGAAGAACTTACTCGTCAAAGTAAAATAGCCCTTCTTTCTGAGTTGAAGCATTTGAGTCAATTGACAACTCTTGACATACAAATCCCAGAGGTTTCCCATTTGCCGAAAACCTTGTTCTTCGACAAGTTAAATAGTTACAAGATTGTTATTGGAGATTTGAGTGCAAGCTTAGAGACTGATTTCAATATTCCAGAGAGGTATGAAACATCTAGATTTTTAGCAATACGATTAAAAGATGGGGTTGACATTCATTCTCTAAAGGGGGTCAAAATGCTGTTTGAAGGAGTTCAAAGTTTACTTTTGGAAGAACTTAATACTGTCCATGATATATTTTATAGACTGAATTTAAAGGGTTTTCCATATCTAAAACATCTGTTGATTGTAAATAATTCCACCATTCAATCTCTCATCTATCCCAAAGACAGACAACAGTCACAACACCCTGAGAAAGCGTTTCCTAAACTGGAGTCATTGTATCTCTATAAGCTCAAGAAGATCGATAATATATGCTCCTGTAAACTTTCTGAACCCTCCTTTGGTAAACTGAAAGTCATCAAGATCAATCTCTGTGGTCAATTAAAGAGTGTGTTCTCAATTTCTGTTGTAAATCTTTTAACTGTTCTTGAAACGATTGAAGTTTCTGAGTGTAACTCTTTGAAGGAGATTGTCTCAGTAGAAGACTCACAAAGCAACACTCAGGAATCCAAACTCGTGCTTCCTAAATTACTTTATTTGAAGCTACAATCTTTGTCTCAGTTTGGTGAATTTTATCCCATACCATCATCAACTGTAAGAGCGGAAAAAGAACTCTTCAACAAAAAGGTTGAAGTTTTAAAATTAGACAGAATGGAGTTGTCCTCAATCCCCATTGCCAACATATGGAGTGATCATTATTCACACAGGTCCTCTTTTAAAAATTTGACACATTTGGATGTTAATGGTTGTTGGAAATTAAAATATCTAATATCATTTTCAATGGCAAAGTCTCTGTTAAGCCTTCAAAGCGTTTTTGTGAGTGAATGTGAGAACATGAGAAGCATCTTTCCTGAGAGCCTACAAATGGAGGCTGACTCAACTCGAATGGGCCTGGCCCACTCAGCTCGACATGGGCTCGAGCCAACTCGACTTGACCTAGGTCACGACCCGTTCAGCTCAACATTGACCCGGACCCACCCAGCTCGACATGGGTCCAGGCCAAATCAGCTCAACACGGGTCTAGGTCGACTCGGCTCTACATAG 3363 0.3925 MDSLIIAGFRKFLRWPLLKAWLKEQLIYLTSYETSVHELKGAVENLKNVRDEILHKVDEEEQRRGREIPLQVKEWIESVNRLISEYEDFNEDTYHELAVFDLLKSGYLPKPGIRYRQSRQAHDIRRKVNGLLQSAKFDTFSYWSGPPSMDAFFSNVGYESFPSREETMRKMIAELEEPSVRMIGLHGLSGMGKTTLVKEIVKVVLEAKKIDVVTMASVTRNPDIRKIQGQIADTLGVILDEESDIARAARIQGMLKSEKKKTLIILDDLWEKVDFNMLGIPYEIHGDNGLKNVKEGKSLLAGSLMNMKDGKSKEARGASPEMKTEETRSQYKGCKILMISESKKVLLSQMGRTENCVFSLEVLKEKEAEMLFKKMAGMGDFNSEFQKLGAQIANKCNGLPMTIVTTARALKNQSRSVWEDSLRRLEWQKLTGAPEFSTKLSYDLLEDEELKYTFLLCGRMGHDALIMDLVKYCIGLGFLQGIYTVRETRDRVYTLVEKLKESGLLSDSYSRDQFTMQDTIRSAALSIANKEKHLFTMTKGKIDEWPDKLEKYAAISLHHCDFIEGFPRRINYPRLRVFHVNNSDPHLKIPKNFFKGMKELKVLILTGIHFSLLDSSISSLTELRLLCLEHCTLDKELSIIGVLKKLRILSFSRSDIEKLPVELQQLKKLQIFDISNCSKLREIPSGVISSLVCLEELYMRNTLIQWEEEELTRQSKIALLSELKHLSQLTTLDIQIPEVSHLPKTLFFDKLNSYKIVIGDLSASLETDFNIPERYETSRFLAIRLKDGVDIHSLKGVKMLFEGVQSLLLEELNTVHDIFYRLNLKGFPYLKHLLIVNNSTIQSLIYPKDRQQSQHPEKAFPKLESLYLYKLKKIDNICSCKLSEPSFGKLKVIKINLCGQLKSVFSISVVNLLTVLETIEVSECNSLKEIVSVEDSQSNTQESKLVLPKLLYLKLQSLSQFGEFYPIPSSTVRAEKELFNKKVEVLKLDRMELSSIPIANIWSDHYSHRSSFKNLTHLDVNGCWKLKYLISFSMAKSLLSLQSVFVSECENMRSIFPESLQMEADSTRMGLAHSARHGLEPTRLDLGHDPFSSTLTRTHPARHGSRPNQLNTGLGRLGST* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0959 1120 SUPERFAMILY L domain-like 537 1052 - -
Pvu10g0959 1120 Coils Coil 43 63 - -
Pvu10g0959 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 457 IPR027417 -
Pvu10g0959 1120 MobiDBLite consensus disorder prediction 1092 1120 - -
Pvu10g0959 1120 Pfam NB-ARC domain 329 430 IPR002182 GO:0043531
Pvu10g0959 1120 Pfam NB-ARC domain 165 283 IPR002182 GO:0043531
Pvu10g0959 1120 Gene3D - 156 356 IPR027417 -
Pvu10g0959 1120 PANTHER - 23 990 - -
Pvu10g0959 1120 Gene3D Ribonuclease Inhibitor 539 1099 IPR032675 -
Pvu10g0959 1120 PRINTS Disease resistance protein signature 182 197 - -
Pvu10g0959 1120 PRINTS Disease resistance protein signature 256 270 - -
Pvu10g0959 1120 PRINTS Disease resistance protein signature 396 410 - -
Pvu10g0959 1120 PRINTS Disease resistance protein signature 664 680 - -
Pvu10g0959 1120 PANTHER RPP4C4 23 990 - -
Pvu10g0959 1120 Gene3D - 362 446 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0959 Pvu-Chr10 33917805 33922006 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0959 - - pvu:PHAVU_010G091900g 2180.6