Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0948 ATGGGTGGTAGTTTTTCCTCTTGTGTCTGTGATGGAGATGCTATCCCTTTGAGGCCAAGGCTTGGTGATTTACCCGAGAGCTGTGTGGCGTTGATGTTGATGTATTTGGACCCACCAGATATTTGCAAGCTTGCGCGATTGAACAAGGCGTTTCGTGATGCTTCGTTGGCTGATTTCATTTGGGAATCGAAGTTGCCTTTGAATTATAAGTTCATCGTGGAGAAAGCTTTGAAGGATGCCAGTGCAGAAGAGTTGGGGAAGAGGGATATTTATGCTAGACTCTGCAGGCCTAATTTGGTAGACAATGGCACCAAGGAAATTTGGCTAGATAAGGGGACTGGTGGGTTGTGTTTGGCGATTTCTTCCAAAGCGTTGAGGATTACAGGGATAGATGATCGGAGATACTGGAGTCGCATGTCGACAGAAGAGTCAAGATTCCATACAGTTGCTTATCTTCAACAAATTTGGTGGCTTGAAGTGGAAGGAGATGTTGATTTTCAATTTCCTCCTGGGACATACAGTGTGTTCTTCAGACTCCAGCTTGGCCGATCTTCCAAGAGATTAGGTCGTCGAGTTTGTAAGAGTGATCACATTCATGGCTGGGATATAAAACCTGTAAAATTTCAGCTAACAACTTCTGATGGCCAACATGCTGTATCCAAAACACATTTGGATAACCATGGACACTGGGTTCTCTACCATGCAGGAAACTTTGTTTCTAAGAATCCTAATGATCTGATGAAGGTCAAATTTTCCTTGGCTCAGATTGATTGTACGCATACCAAAGGTGGTTTGTGTGTAGATTCTGTTTTTATATGCAATAGTGATGTAAAACAAGAGGTGTAG 846 0.4303 MGGSFSSCVCDGDAIPLRPRLGDLPESCVALMLMYLDPPDICKLARLNKAFRDASLADFIWESKLPLNYKFIVEKALKDASAEELGKRDIYARLCRPNLVDNGTKEIWLDKGTGGLCLAISSKALRITGIDDRRYWSRMSTEESRFHTVAYLQQIWWLEVEGDVDFQFPPGTYSVFFRLQLGRSSKRLGRRVCKSDHIHGWDIKPVKFQLTTSDGQHAVSKTHLDNHGHWVLYHAGNFVSKNPNDLMKVKFSLAQIDCTHTKGGLCVDSVFICNSDVKQEV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0948 281 PANTHER F-BOX PROTEIN PP2-A13 1 281 - -
Pvu10g0948 281 Pfam Phloem protein 2 117 272 IPR025886 -
Pvu10g0948 281 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Pvu10g0948 281 SUPERFAMILY F-box domain 18 75 IPR036047 GO:0005515
Pvu10g0948 281 PANTHER F-BOX PROTEIN PP2-A15 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0948 Pvu-Chr10 33595380 33598380 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0948 - - gmx:100814033 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0948 10 33595380 33598380 Pvu10g0948 10 33595380 33598380 ECH