Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0947 ATGGACTTTGTTCCCTTTCATGATGGCAACATACACGCGATTCTTGACTCACAATATCTCCACTCTCCACTAGATGTTAATCACACTTTGCAGACTCATTCCTCTCTCGTTCGGATGCTTTCTCAAGAAAGAGAGTTAGAGGGCCACCTTGGTTGTGTCAATGCGGTGGCTTGGAATTCGAAAGGTTCATTGTTGATATTCAGATCAAATGATACTCGGAACAATATTTGGAGCTATTATGGCCAAAAACTTCTACATAAAATTGAGACAAGACATACTGCAAATATATTTCGTACAAAGTTTATACCAAAAACTTCTGATGAGCTTGTAGCATTTGGAGCTGGAGATGTTGAGGTTCGGTTATTTAACTTGTCTTGCTTAAGTTGGAGTGGATCTAGCGACAATTCAATCATTGCTCCATCTGCACTTTACCAATGCCATTCTCGAAGAGTCAAGAAATTGGTTGTTGAAGATGGCAACCCTAATGTAGAAGGTACCTCTTGTTCTCCACCTGGGTCTTTACACCAAGAGTGTCGAGATATTCTTCTTGACTTACGAAGTGGATCTAAAAGATCACTTGCTGATCCTCTTAAACATGTCCTTTCTTCAAAGTCTTGTGATATTAGTTCAACTAGGTCACATTTGCTCCTTGTTGGTGGGAGTGATGTCTTTGCACGCTTATATGATAGAAGGATGTTGCCACCTCTCAGCTCACATCGAAAAAGAATGTCTCCTCCTCCTTGCGTTAATTATTTTTGTCCAATGCATCTTTCTGATCATGGACATCCAAGCTTACACTTAACTCATGTTACATTCAGTCCTGATGGACATGAGGTTCTCCTCAGCTATAGTGTAGAGCATGCTTACCTCATGAATGTAAATCACGCTGTTGTGAATGAGATGCAATATGCTTTAGAAGACGTAACAAAGATGATGATTTACTCTCCAACAATTGATGGGACAGAGTTGCAGTCTTGTGTGTCTAAAGTCTTCCTAAATGGATTTACTATTAAAAAGAACATTGCTGCAAAGCTTGACAAGTGCAAGAAATTGATAAAATATGCTAAGAAATCTTTGGACAATGGGACGCCTTATTATGGAATTGAGGCATGTAATGACGTTTTGAATGGCTATAGCCATATCATTGGAAAAATTGATAATTCCTCCTACAAAGCATTGTACTACATGTCAAAAGCACTGTCACAATTGGATAGACATGAAGATGCTTTGGATTTTGCT 1239 0.3898 MDFVPFHDGNIHAILDSQYLHSPLDVNHTLQTHSSLVRMLSQERELEGHLGCVNAVAWNSKGSLLIFRSNDTRNNIWSYYGQKLLHKIETRHTANIFRTKFIPKTSDELVAFGAGDVEVRLFNLSCLSWSGSSDNSIIAPSALYQCHSRRVKKLVVEDGNPNVEGTSCSPPGSLHQECRDILLDLRSGSKRSLADPLKHVLSSKSCDISSTRSHLLLVGGSDVFARLYDRRMLPPLSSHRKRMSPPPCVNYFCPMHLSDHGHPSLHLTHVTFSPDGHEVLLSYSVEHAYLMNVNHAVVNEMQYALEDVTKMMIYSPTIDGTELQSCVSKVFLNGFTIKKNIAAKLDKCKKLIKYAKKSLDNGTPYYGIEACNDVLNGYSHIIGKIDNSSYKALYYMSKALSQLDRHEDALDFA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0947 413 Gene3D - 28 329 IPR015943 GO:0005515
Pvu10g0947 413 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 22 412 IPR045151 -
Pvu10g0947 413 SUPERFAMILY WD40 repeat-like 42 296 IPR036322 GO:0005515
Pvu10g0947 413 ProSiteProfiles Trp-Asp (WD) repeats profile. 46 87 IPR001680 GO:0005515
Pvu10g0947 413 PANTHER WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 22 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0947 Pvu-Chr10 33588481 33589869 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0947 K11807 - gmx:100793917 662.144