Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0943 ATGGACGGCGACGACGAGACCTCGGGTCCGATGATCGACGAAATCTACGCCAACGGCGGCGGCGACGACGGAGACCAGCGGAGCCGTCGCGCGATCATGAGCGGTGACCAGCTCGATGTCGAGGCGTACGCGGCGCTGTACTCGGGGCGCACGAAGATTATGCGGCTCATCTTCATCGCCGACAAGATGAACAACGCGGCGACGCAGCTCGAGGCGCTGCGCATGGCCTACGACGAGATTAAGAAGGGCGAGAACACACAGCTTTTCAGGGAGGTCGTGCAGAAGATCGATGGAAGATTGGGAGCGAACTATGGCATGGACACAGCGTGGTGCGATGCCGTGGATCGAAGAGCGGAGCAGAAGAAGGAGAAACTCGAGAATGAACTCAATGCGTATCGGACAAACTTGATTAAAGAAAGCATTAGAATGGGATACAATGATTTTGGAGACTTTTATTATGCTCATGGTCAATTGGGGGAAGCTTTTAAAAGTTATGTCCGCACTCGGGATTATTGCACCACATCAAAGCATATTATTCACATGTGTATGAGTGCAATTCTTGTCAGCATTGAGATGGGTCAATTTCCTCATGTTACAAGCTATGTTAGCAAGGCAGAACAAGCACTGGATGTCCATGATGCAGTAATCGTTGCAAAGCTACGATGTGCTGCTGGATTGGCTAATCTAGAGGCCAAAAAGTACAAACTTGCTGCCCGAAAGTTTCTAGAAACAGGACCTGAACTAGCAAGTCACTATAATGATGTAATTGCACCTCAAGACGTTGCAACATATGGAGGACTTTGTGCACTTGCTACATTTGATAGGGTAGAGTTAAAGAGCAAAGTTATAGACAATTCCAACTTCCGCAATTTCTTAGAGCTAGTACCTGAAGTAAGGGAACTGATAAATGATTTTTACTCGAGCCACTATGCTTCATGTCTGGAATACCTCGGGAACCTCAAAGCAAACCTATTGCTTGATATACATTTGTATGACCATGTTGAGACACTTTATGATCAAATTCGTCACAAAGCCCTTATCCAGTATACACACCCATTTGTGTCTGTTGATTTGAACATGATGGCTAATGCATTCAAGACAACTGTTGCTGGACTTGAGAAAGAGCTAGAAGCATTGATCACTGATAATCAGATACAGGCTCGAATTGATTCACACAACAAAATTTTGTATGCACGGCATGCGGATCAAAGGAATGCCACCTTTCAAAGGGTTCTAGAAACTGGAAGAGAATTTGATCGTGATGTTCGTTCCATGTTACTGAGATCAAATCTTATCAAGCATGAGTACAATCTTAGAGCATTAAGGAAACTTTGA 1335 0.4532 MDGDDETSGPMIDEIYANGGGDDGDQRSRRAIMSGDQLDVEAYAALYSGRTKIMRLIFIADKMNNAATQLEALRMAYDEIKKGENTQLFREVVQKIDGRLGANYGMDTAWCDAVDRRAEQKKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGQLGEAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFPHVTSYVSKAEQALDVHDAVIVAKLRCAAGLANLEAKKYKLAARKFLETGPELASHYNDVIAPQDVATYGGLCALATFDRVELKSKVIDNSNFRNFLELVPEVRELINDFYSSHYASCLEYLGNLKANLLLDIHLYDHVETLYDQIRHKALIQYTHPFVSVDLNMMANAFKTTVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLETGREFDRDVRSMLLRSNLIKHEYNLRALRKL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0943 444 Gene3D - 36 382 - -
Pvu10g0943 444 ProSiteProfiles PCI domain profile. 230 403 IPR000717 -
Pvu10g0943 444 PANTHER 26S PROTESOME SUBUNIT 6 1 439 IPR019585 -
Pvu10g0943 444 Pfam 26S proteasome subunit RPN7 107 281 IPR045135 -
Pvu10g0943 444 PANTHER BNAA09G38820D PROTEIN 1 439 - -
Pvu10g0943 444 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 332 415 - -
Pvu10g0943 444 SUPERFAMILY "Winged helix" DNA-binding domain 327 407 IPR036390 -
Pvu10g0943 444 SMART PINT_4 332 415 IPR000717 -
Pvu10g0943 444 MobiDBLite consensus disorder prediction 1 28 - -
Pvu10g0943 444 Pfam PCI domain 297 398 IPR000717 -
Pvu10g0943 444 Coils Coil 111 142 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0943 K12175 - gmx:100782579 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0943 10 33541167 33545550 Pvu10g0943 10 33541167 33545550 ECH