Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0939 ATGGGACTCAGATCACGTACGCTAGAAATCACCGTCATCTCCGGTGAAAACGTCCGCATAATGGAGGACGCATACGTCGTCGTTCGGGCGGAGTCGCTCAACTGCTGCACCACCAGACCGGCCAAAGACGATGGCACCAACTTCCTCTCGTGGAACGAGAAGTTCCTGTTGGACATGCCCATGCATGCAAGATCGATCACATTCGAGGTCCAATGCACCAAATTCAAGGCTTTTCGCCCTCTTGGGGTGGCCAGAATCGCTGCCTCCGACATCCTCGGGGACGCCGCCGTCCCAGAAAATCAGTTGCAAGAGTTGAGTTACGGGTTGAGGGACTGGGAAGGGAAGAGAAACGGGGTCATTCACTTCACCGTGAAAGTGGTACCTCCGCCGCCAACAACGGAGGAGAAATGTCTGAAGCCCAGCGTGAAAGCGGTGGTGACCGGAAAGGGTTGCGGTGACGGAATGAAGGTCGGTGACAAGAAGAAGGAAGTTGTAGTCGGTGTCCCATTTTGGTGTTACTACCCTAGCATTGTTTAG 537 0.5438 MGLRSRTLEITVISGENVRIMEDAYVVVRAESLNCCTTRPAKDDGTNFLSWNEKFLLDMPMHARSITFEVQCTKFKAFRPLGVARIAASDILGDAAVPENQLQELSYGLRDWEGKRNGVIHFTVKVVPPPPTTEEKCLKPSVKAVVTGKGCGDGMKVGDKKKEVVVGVPFWCYYPSIV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0939 178 Gene3D C2 domain 4 144 IPR035892 -
Pvu10g0939 178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 131 IPR035892 -
Pvu10g0939 178 SMART C2_3c 7 100 IPR000008 -
Pvu10g0939 178 PANTHER INGRESSION PROTEIN FIC1 5 175 - -
Pvu10g0939 178 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 175 - -
Pvu10g0939 178 CDD C2_SRC2_like 7 122 IPR044750 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0939 Pvu-Chr10 33462343 33463146 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0939 - - gmx:100810797 236.498