Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0938 ATGGGACTCAGATCACGTACGCTAGAAATCACCGTTATCTCCGGTGAAAACGTCCGCATAATGGAGGACGCATACGTCGTCGTTCGGGCGGAGTCGCTCAACTGCTGCACCACCAGATCGGCCAAAGACCATGGCACCAACTTCCTCTCCTGGAACGAGAAGTTCCTGTTGGACGTGCCCATGCATGCAAGATCGATCACATTCGAGGTCCAATGCACCAAATTTAAGGCTTTTCGCCCTCTTGGGGTGGCCAGAATCGCTGCCTCCGACTTCCTCGGGGACGCCGCCGTCCCGGAAAATCAGTTGCAAGAGTGGAGTTACGGGTTGAGGGACTGGGAAGGGAAGAGAAACGGGGTCATTCACTTCGCCGTGAGACTAGTACCTCCGCCGCCACCAAAGGAGGAGAAATGTCTGAAGCCCAGCGTGAAAGCGGTGGTGACCAGAAAGGGTTGCGGTTACGGATTGAAGGCCGGTGACAAGAAGAAGGAAGTTGTAAACCGTGTCCCATTTTGGTGGAACTACCCTAACATTGTTTAG 537 0.5419 MGLRSRTLEITVISGENVRIMEDAYVVVRAESLNCCTTRSAKDHGTNFLSWNEKFLLDVPMHARSITFEVQCTKFKAFRPLGVARIAASDFLGDAAVPENQLQEWSYGLRDWEGKRNGVIHFAVRLVPPPPPKEEKCLKPSVKAVVTRKGCGYGLKAGDKKKEVVNRVPFWWNYPNIV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0938 178 SMART C2_3c 7 100 IPR000008 -
Pvu10g0938 178 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 175 - -
Pvu10g0938 178 Pfam C2 domain 7 90 IPR000008 -
Pvu10g0938 178 PANTHER INGRESSION PROTEIN FIC1 5 175 - -
Pvu10g0938 178 Gene3D C2 domain 4 146 IPR035892 -
Pvu10g0938 178 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Pvu10g0938 178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0938 Pvu-Chr10 33454609 33455331 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0938 - - gmx:100810797 259.225