Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu10g0937 | ATGGAGGCAAAACAACACAAACAACTCACCTTGGAGATCACAATTATGTCGGGAGAAAACATAAGTGTGGATCAAAATTCAGTGACAGAGATGAATGTTGTTGTTCGTGCAGAGTCTTTGAATTGTTGCAGAACCAAAATGGTGAATGGAGATGATGGAGTGCATGCATGGAATGAGAAATTATTGTTAGAGGTTCCTTCATATGCAAGATCTCTTACGTTTGAGGTCCAATGCAACAAATACAAAGAATTTCGTCCTGTTGGGGTAGCAAGGATTGCTCTTTCGGATCTACTTTGTGGAAAAAATAATAATGTTTTATCCCAAATGTTTTGTTACGGTTTGAGAAACTGGGAGGGTCGACGTAACGGTGTTATTCATTTCTGGGTGAAGGTTGTGGATAATTTATCTGCAGAAACAAAACAAGAGAAAGACATAAAGATGGTGAATTGTAGAGGAATTGAGAATGAAGTTACAGGGAGTGATGTTGTGATTGGCATTCCAGTTAATTGGTGCACAAACCAAATGGTTGTTTGA | 534 | 0.3839 | MEAKQHKQLTLEITIMSGENISVDQNSVTEMNVVVRAESLNCCRTKMVNGDDGVHAWNEKLLLEVPSYARSLTFEVQCNKYKEFRPVGVARIALSDLLCGKNNNVLSQMFCYGLRNWEGRRNGVIHFWVKVVDNLSAETKQEKDIKMVNCRGIENEVTGSDVVIGIPVNWCTNQMVV* | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu10g0937 | 177 | SMART | C2_3c | 10 | 106 | IPR000008 | - | |
| Pvu10g0937 | 177 | Gene3D | C2 domain | 3 | 154 | IPR035892 | - | |
| Pvu10g0937 | 177 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 8 | 133 | IPR035892 | - | |
| Pvu10g0937 | 177 | PANTHER | INGRESSION PROTEIN FIC1 | 7 | 172 | - | - | |
| Pvu10g0937 | 177 | PANTHER | C2 DOMAIN PROTEIN | 7 | 172 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu10g0937 | Pvu-Chr10 | 33433263 | 33433949 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu10g0937 | - | - | gmx:100810274 | 221.476 |