Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0933 ATGGCTTCAGACCCCAGAAAGGGACTGGTTCTGAGTTCAAAGGCCCTAGCTGATGCAGCTTCATGGTACTGTGCCTTTGTTCTTGTTGCCCTTCTGCTCCTAAGCATGTTCAGAGACAGCTCCATGCTTCCAACCCATGCCAACTTCGTAGACAACCAACTCCTGTTCCGGCCATGCGAGGAAATCTATGTTGTTGGAGAAGGTGAGACACTTCACACAATAAGTGACAAGTGTGGTGACCCTTTTATAGTTGAGAACAACCCTCACATCCATGACCCTGATGATGTCTTCCCTGGCCTCGTTATCAAGATCACACCCTCGTATCATCCCTAG 333 0.4895 MASDPRKGLVLSSKALADAASWYCAFVLVALLLLSMFRDSSMLPTHANFVDNQLLFRPCEEIYVVGEGETLHTISDKCGDPFIVENNPHIHDPDDVFPGLVIKITPSYHP* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0933 110 PANTHER EMBRYO SAC 1 5 109 - -
Pvu10g0933 110 Pfam LysM domain 63 105 IPR018392 -
Pvu10g0933 110 CDD LysM 62 104 IPR018392 -
Pvu10g0933 110 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN PROTEIN 5 109 - -
Pvu10g0933 110 Gene3D LysM domain 53 109 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0933 Pvu-Chr10 33265696 33266028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0933 - - gmx:100815990 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0933 10 33265696 33266028 Pvu10g0933 10 33265696 33266028 ECH