Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0920 ATGGCGGATGCTGATCTCACCTCCCCGCTCCTCGCCTCCGATCACATCGTACTCACTGTGCACTCCTCTGCCGCTCCCTCCGCCGATGGCAACCCCTACCGCGCGCTCGGATGCGACGACGAGCTCGTCGTGCCGCCTACCGCAACCCTGGACCCCTTCCGCAACGGCACGCCGGTGGTTGAGGGGCTTTACGAGTGGGCGAAGACGATCCTGTGTCTGCCTGTGGCGCTGCTGCGGCTCGCGCTGTTCGGGATGTGCCTCGCCGTGGGGTACGTGGCGACGAAGGTGGCACTGCAAGGGTGGAAGGACAAGGAGAATCCCATGCCGAAGTGGAGGTGTAGGGTTATGTGGATCACAAGAATGTGCGCCAGATGCATTCTTTTTTCGTTTGGCTATCAGTGGATAAAACGGAAAGGAAAACCTGCACCAAGGGAAATTGCTCCTATAATTGTATCCAATCATGTATCATACATTGAACCTATCTTCTATTTCTACGAATTATTTCCCACTATTGTGGCATCTGAGTCTCATGACTCCATACCTTTTGTTGGCACAATTATAAGAGCAATGCAGGTCATATATGTTAACAGATTCTTACCATCATCAAGGAGGCAGACTATCAGGGATATAAAGAGAAGGGCCTCTTGTGATAAATTTCCTCGAGTACTTTTATTTCCTGAGGGAACGACAACTAATGGCAGGAACCTTATCTCCTTCCAACTTGGTGCATTTATCCCAGGATACCCAATCCAGCCTGTGATTGTACGCTATCCTCATGTGCACTTTGACCAATCCTGGGGTGATGTTTCTTTGGGGAAGCTTATGTTCAGGATGTTCACTCAATTTCACAACTTCTTTGAGATAGAATATCTTCCAGTTGTTTATCCCCTGGATGATAAGGAAACTGCTGTACATTTTCGGGAGAGGACTAGCCGCGCTCTTGCAACTGCATTGAATGCTGTCCAGACAGGACATTCTTATGGAGACATAATGCTTAATTTGAAAGCACAAGAAGCAAAACAGGAGAACCCTTCGAGTTATATGGTTGAAATGACTAAGTTGGAAGAATCATTTCATGTCAGCAACACGGAAGCTGTGGACTTTCTGGATAAATTTTTGTCCATGAATCCTGATCCCAGTGGTCGTGTCCAATATCATGACTTCTTGAGGGTTTTAAGACTTAAGGCTTGCCCGCTATCTGCAAAGATATTTTCATTCATTGATGTGGAGAAGTGTGGGACAATTACTTTCAGACAGTTCTTGTATGGATCTGCCCATGTCATGTCGCAGCCAGGGTTCCATCAAGCCTGTGAAGAAGCCTTTGCTGGGTGTGGTGGTGCAGTAAAGCCCTATATTGTGGAACAAGAGTTTCGAGATTTCATCCAACCTGTTATCATCAGCTGGAATGCGGATGAGGTCCATGAGCTTTTTATGTTATTTGATAATGATGATGATGGAAGGATTGCCGAGAATGATTTTGTTTTATGCCTTAGAAGAAATCCTCTTCTCGTAGCATTTTTTACACCTCAACCAAAGCAAAAGGAATTTGAAGGTAATGGGGTGATAGAGATAGTGTGA 1578 0.4645 MADADLTSPLLASDHIVLTVHSSAAPSADGNPYRALGCDDELVVPPTATLDPFRNGTPVVEGLYEWAKTILCLPVALLRLALFGMCLAVGYVATKVALQGWKDKENPMPKWRCRVMWITRMCARCILFSFGYQWIKRKGKPAPREIAPIIVSNHVSYIEPIFYFYELFPTIVASESHDSIPFVGTIIRAMQVIYVNRFLPSSRRQTIRDIKRRASCDKFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQFHNFFEIEYLPVVYPLDDKETAVHFRERTSRALATALNAVQTGHSYGDIMLNLKAQEAKQENPSSYMVEMTKLEESFHVSNTEAVDFLDKFLSMNPDPSGRVQYHDFLRVLRLKACPLSAKIFSFIDVEKCGTITFRQFLYGSAHVMSQPGFHQACEEAFAGCGGAVKPYIVEQEFRDFIQPVIISWNADEVHELFMLFDNDDDGRIAENDFVLCLRRNPLLVAFFTPQPKQKEFEGNGVIEIV* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0920 525 Gene3D - 341 522 - -
Pvu10g0920 525 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 122 305 - -
Pvu10g0920 525 PANTHER BNAA03G56890D PROTEIN 31 511 - -
Pvu10g0920 525 CDD LPLAT_LPCAT1-like 123 331 IPR045252 GO:0008374
Pvu10g0920 525 ProSiteProfiles EF-hand calcium-binding domain profile. 468 503 IPR002048 GO:0005509
Pvu10g0920 525 SMART plsc_2 148 258 IPR002123 GO:0016746
Pvu10g0920 525 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 31 511 - -
Pvu10g0920 525 Pfam Acyltransferase 145 252 IPR002123 GO:0016746
Pvu10g0920 525 ProSitePatterns EF-hand calcium-binding domain. 481 493 IPR018247 -
Pvu10g0920 525 SUPERFAMILY EF-hand 352 509 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0920 Pvu-Chr10 32951229 32960898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0920 98 329 Acyl Lipid Metabolism Gene Families AT1G80950 30.534 1.38e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0920 K13510 - gmx:100818109 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0920 10 32951229 32960898 Pvu10g0920 10 32951229 32960898 ECH