Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0912 ATGTTGATCCCTCATCCATCAATGCTACTTGCATCACAAAACACCAACATGGAACCACAACAAATCAACTTACAGGCTCCTACTCCAAACCAGTCAAACATACCCTCTGAGTTCGTCTGGCCTGATAATGAGAAACCATGCCTTGAACCACCAAAACTCAAAATTCCACCCATTGACATGAAGGGCTTTCTCTCTGGAGACCCAGAAACTGTGTCAGCCATTTGTGCTGAAGTGAACGCGGCATGCAGGAAGCATGGCTTCTTTCTTGTTGTCAACCATGGTGTTGACAAGAAGCTCGTAGAGAAAGCTCATAAGCTCATAGACACTTTCTTCTGCATGGAACTGCCAGAGAAGCAGAAGCTTCAGAGAAAACTTGGAGAACATTGTGGCTATGCTAATAGCTTTATTGGAAGGTTCTCCTCCAAACTTCCTTGGAAGGAAACACTTTCTTTCCATTACGCCCCTGATACCAAAACTGTTGAGGACTATTTCCTAAATTCTATGGGGGAAGAGTTCAGGGAATTTGGGAGTTTCTTTCAAGAATACTGTGAAGTGATGAGCAATCTGTCTCTTGAGATCATGGAGCTGCTGGGAATGAGCCTAGGAGTGAGCAGGGAATGTTTCAGGGATTTCTTCAAAAACAATGAGTCTGTTATGAGGTTGAATTACTACCCACCATGCCATAAACCTGAGTTAGCTTTAGGAACTGGACCTCATTGTGACCCCACTTCCCTAACCGTTCTCCACCAAGATCAAGTCGAGGGCCTCCAAGTGTTTGTCGATGGAAAATGGTGCTCTGTCGCCCCAAAAGAAGATGCTTTCGTTGTCAACATTGGCGACACATTTATGGCTCTTTCCAATGGGATATTCAAGAGTTGCTTACATAGAGCAGTTGTGAACAACCAAATTGTGAGAAAATCTCTTGCTTTCTTCCTATGTCCAAATAAAGACAAAGTGGTCAGTGCTCCAAAGGAACTAATTACCGTGGAGAATCCAAAGAAATATCCAGATTTCACATGGCCAAATCTTCTTGAGTTCACACAGTTACATTACAGGTCTGACCCTGAAACACTTGATGCCTTCGCCAACTGGGTACTAGAGAAGAACAAGTGA 1113 0.4367 MLIPHPSMLLASQNTNMEPQQINLQAPTPNQSNIPSEFVWPDNEKPCLEPPKLKIPPIDMKGFLSGDPETVSAICAEVNAACRKHGFFLVVNHGVDKKLVEKAHKLIDTFFCMELPEKQKLQRKLGEHCGYANSFIGRFSSKLPWKETLSFHYAPDTKTVEDYFLNSMGEEFREFGSFFQEYCEVMSNLSLEIMELLGMSLGVSRECFRDFFKNNESVMRLNYYPPCHKPELALGTGPHCDPTSLTVLHQDQVEGLQVFVDGKWCSVAPKEDAFVVNIGDTFMALSNGIFKSCLHRAVVNNQIVRKSLAFFLCPNKDKVVSAPKELITVENPKKYPDFTWPNLLEFTQLHYRSDPETLDAFANWVLEKNK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0912 370 SUPERFAMILY Clavaminate synthase-like 29 353 - -
Pvu10g0912 370 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 214 314 IPR005123 -
Pvu10g0912 370 PANTHER GIBBERELLIN 20-OXIDASE 25 366 - -
Pvu10g0912 370 Pfam 2OG-Fe(II) oxygenase superfamily 216 314 IPR044861 -
Pvu10g0912 370 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 25 366 - -
Pvu10g0912 370 Gene3D - 25 349 IPR027443 -
Pvu10g0912 370 PRINTS Isopenicillin N synthase signature 78 95 - -
Pvu10g0912 370 PRINTS Isopenicillin N synthase signature 192 208 - -
Pvu10g0912 370 PRINTS Isopenicillin N synthase signature 302 320 - -
Pvu10g0912 370 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 158 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0912 Pvu-Chr10 32648913 32651094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0912 53 364 Glycosyltransferase AT5G59530 31.975 2.26e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0912 K05282 - gmx:100777224 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0912 10 32648913 32651094 Pvu10g0912 10 32648913 32651094 ECH