Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0908 ATGGCAGAAGATGAGATGAAAGGGGTTCCCAAAGTGCTGGTTCTGGGTCCTCCATTGTGCTTCCCATCAATTCAATCTCTCTACTCTCACAAATTCCATTTTCTCAAACCTCACCTCTCAGATCTCTCACTTCAATACTTCCTTCACCACCACCATCCTCCCTCCATTACCGCCATTCTCTGCAGCGCTAACTACCCCATCACCGCCGAAGTCCTCCGCCTCCTCCCGTCGCTCCACCTCCTCGTCACCTGCAGCGCCGGAACAAATCATGTCGACCTCCGTGAGTGTCGCCGCCGCGGAATCCAGGTCGCCAGCGCCGGACCGCTGTTCTCGGAGGATGTGGCGGATACAGCCGTGGCTCTGCTCATTGACGGAATGAGGAAAATCTCGGCGGCGGATCGGTGGTTAAGGACGCAGAATCTCCACAATACGCCCTGGGATTTATTCCCATTTGGGTCCAAGTTATCAGGGAAGCAAGTTGGGATTGTTGGATTGGGAAGCATTGGCATGGAAGTGGCGAAGAGGCTGGAGTGTTTTGGTTGCATAATCTCATACAACTCTAAGCATAAAAAAACTAGAGTTTCATATCCTTTCTATTCCAGTGTTGTTGAGCTTGCAACTACTTGCGACGTTCTTGTGCTCTGTTGTGAACTAAATGAGCAAACAAAACACATAATTAACAGGGAAGTGATTTTGGCGTTAGGAAAAGGAGGATTTATTGTGAATATTGGAAGAGGGGTTCTTATTGATGAAAAGGAACTGGTAAAGTGTTTGATGGAAGGTGAAATTGGAGGTGCTGGTTTGGATGTGTTTGAGAACGAGCCTCATGTTCCCAAAGAGCTCTTTCAAATGAATAATGTGGTTTTGTCTCCTCATTCTGCTGCCATTACTACGGAATCTTTCATGAATATGTGTGATCTTGCTGGAGGGAATTTAGAAGCCTTTTTCTCAAATAAGCCCCTAATTACTCCAGTGATGTTGCCTGAATAA 990 0.4707 MAEDEMKGVPKVLVLGPPLCFPSIQSLYSHKFHFLKPHLSDLSLQYFLHHHHPPSITAILCSANYPITAEVLRLLPSLHLLVTCSAGTNHVDLRECRRRGIQVASAGPLFSEDVADTAVALLIDGMRKISAADRWLRTQNLHNTPWDLFPFGSKLSGKQVGIVGLGSIGMEVAKRLECFGCIISYNSKHKKTRVSYPFYSSVVELATTCDVLVLCCELNEQTKHIINREVILALGKGGFIVNIGRGVLIDEKELVKCLMEGEIGGAGLDVFENEPHVPKELFQMNNVVLSPHSAAITTESFMNMCDLAGGNLEAFFSNKPLITPVMLPE* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0908 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 111 295 IPR036291 -
Pvu10g0908 329 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 IPR006140 GO:0051287
Pvu10g0908 329 Gene3D - 51 320 - -
Pvu10g0908 329 CDD HPPR 10 317 - -
Pvu10g0908 329 PANTHER GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 1 325 - -
Pvu10g0908 329 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 56 325 IPR006139 GO:0016616|GO:0051287
Pvu10g0908 329 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 10 140 - -
Pvu10g0908 329 Gene3D - 111 297 - -
Pvu10g0908 329 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 1 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0908 Pvu-Chr10 32493029 32495477 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0908 - K15919 gmx:100776772 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0908 10 32493029 32495477 Pvu10g0908 10 32493029 32495477 ECH