Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0907 ATGGAAGACCAACAATTGAAAAACCTTAATCTCCCCAAAGTCCTTCTTCACGGTCCCCCAGGTTTTTCCTCTGTTATCCAGCCACCCTATTCCCAAAAGTTCCATTTTTTAAACCACTCTTCCATTCCCCTTCACCAATTTGCGGCCACCCACTCCCACCATTGCGCCACCGTGGCCGCCGTCCTCTGTGACGGCGGATACCCCCTCACCGTCGACATGCTACGCCTCCTCCCGTTGCTCCGCCTCGTTGTCACCGCCAGCGCCGGCACCGATCACATCGACCTGGACGAGTGCCGCCGCCGCGGAATTCAAATTGCCGGCGCCGGAAACTTGTTTTCCGAGGACGTCGCCGATTTGGCGGTGGCTTTGTTGATCGACGTGGTGATGAAGATTTCCGCGGCGGATCGGAGTTTGAGAAAACGGCGCGTTGATTCACGAGCTATTACGCTTGCTTCGAAGATTTATCAAATAAATTATTATTTGCTATTCTCACTCCTAAAATCACATTCTAAAAGGAATTATCTGTTATTTTGA 534 0.5131 MEDQQLKNLNLPKVLLHGPPGFSSVIQPPYSQKFHFLNHSSIPLHQFAATHSHHCATVAAVLCDGGYPLTVDMLRLLPLLRLVVTASAGTDHIDLDECRRRGIQIAGAGNLFSEDVADLAVALLIDVVMKISAADRSLRKRRVDSRAITLASKIYQINYYLLFSLLKSHSKRNYLLF* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0907 177 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 54 133 IPR006139 GO:0016616|GO:0051287
Pvu10g0907 177 Gene3D - 113 155 - -
Pvu10g0907 177 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 29 141 - -
Pvu10g0907 177 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 1 153 - -
Pvu10g0907 177 Gene3D - 49 112 - -
Pvu10g0907 177 PANTHER GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0907 Pvu-Chr10 32473858 32474805 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0907 - K15919 vra:111240515 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0907 10 32473858 32474805 Pvu10g0907 10 32473858 32474805 ECH