Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0906 ATGGAGGAAGCCAGAGAGTCTCTCACATCCATCAACGGCGATTTCGGCTTCGGCGGTGCCACCGATCGCCGATTCGCCTTTTCGCGCCAATCTTCCTTCCAACAACCTCACACGCCAATAGACATTCCCGCACACGGCCTACACCACCACCTCTACTGGTCCGCGCGTGACGATAAGCCCTCCGCCTCGCTCCGCCAATCGTCCTTCTCCTCCTTCGTTTTCTCCGTCTTCCGCAACGTTAGATCTGGCCAAAGGTATATGAAAAGGCTCTTCCTGATGATCTCGCTCAATGTCGCGTACTCCACCGCTGAATTGCTCATTGGCCTCTTCACAGGCCGCGTAGGTTTGGTGTCTGATGCGGTTCACTTGACTTTTGGATGTGGTCTTCTTACATTTTCGTTATTTGTTATGGCTGCGTCTAGGAAGAAGGCCGATCGAGAGTATACTTATGGGTATAAAAGGCTAGAAGTCTTGTCTGCATTTACAAATGCCCTGTTTCTTTTGTTTATGTCATTCTCCCTAGCAGTTGAGGCACTTCATGCCTTCATACAAGATGAATCAGAGCACAAGCATTACTTGATTGTTTCTGCGGTGACCAATTTATTTGTGAATCTCGTTGGTGTATGGTTCTTCAGAAACTATGCTCGGATTAATCTTGCTTACAGAAATGCAGAAGATATGAATCACCACTCTGTTTTCCTGCATGTCCTTGCAGATTCCATTCGCAGTGCAGGTCTGATATTGGCATCCTGGTTATTGTCCATCAGGGTTCAGAATGCAGAAGTCTTGTGTTTAGGACTTGTTTCTGTTGCAGTTTTTATGCTTGTTCTGCCTCTCTTTAGGGCAACTGGTGGTATCTTGCTCCAAATGGCACCTCCGAGCATCCCAACTACTGCTTTGAACAAATGCTTGAGACAGATTTCTGCTCGGGAAGATGTAGTGGAAGTCTCCCAGGTTCGTTTCTGGGAATTAGTGCCAGGTCATGTGATCGGTTCACTTATAGTACAGGTAAAGGAAGGGACAAACGATCGGCCAATACTAGAATTTGTGCATGGTCTATACCATGATTTGGGCGTGCAGGACCTTACGGTGCAGACTGATAATGCGTGA 1110 0.4739 MEEARESLTSINGDFGFGGATDRRFAFSRQSSFQQPHTPIDIPAHGLHHHLYWSARDDKPSASLRQSSFSSFVFSVFRNVRSGQRYMKRLFLMISLNVAYSTAELLIGLFTGRVGLVSDAVHLTFGCGLLTFSLFVMAASRKKADREYTYGYKRLEVLSAFTNALFLLFMSFSLAVEALHAFIQDESEHKHYLIVSAVTNLFVNLVGVWFFRNYARINLAYRNAEDMNHHSVFLHVLADSIRSAGLILASWLLSIRVQNAEVLCLGLVSVAVFMLVLPLFRATGGILLQMAPPSIPTTALNKCLRQISAREDVVEVSQVRFWELVPGHVIGSLIVQVKEGTNDRPILEFVHGLYHDLGVQDLTVQTDNA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0906 369 Gene3D Cation efflux protein transmembrane domain 86 287 IPR027469 -
Pvu10g0906 369 SUPERFAMILY Cation efflux protein transmembrane domain-like 84 289 IPR027469 -
Pvu10g0906 369 PANTHER METAL TOLERANCE PROTEIN C2 6 368 - -
Pvu10g0906 369 TIGRFAM CDF: cation diffusion facilitator family transporter 87 343 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Pvu10g0906 369 PANTHER - 6 368 IPR045316 GO:0005385|GO:0006829|GO:0006882
Pvu10g0906 369 Pfam Cation efflux family 90 288 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0906 Pvu-Chr10 32451396 32457200 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0906 226 368 Organic Solute Cotransporters AT2G04620 27.083 1.69e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0906 K14692 - gmx:100809496 650.588