Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0904 ATGAACGGCGGTGGAGGTGACCTGCCACTGCCGCCGCAGCCCTCCAACGGCGGTGAGTTCCTCCTCTCTCTCATCCAACGTCCCCACCACTCCCACCCCCACCCGCGGCAACAGTCTCCAGCGATAGATCCCGCAGTTGCCGTCGTCGGTCCAACGATCCCCGTCGGCGCTCCGCAGTGGCCAATCGCCGGCGCCGATCACCCACACCCCCTCCCTCTCCCTCACCAATTTCCTCCTTGGTCCCATACTCTCTCTTCTCCGCTTTACCCTCCGAACTTTTTCGGGTTGCCCCATAACCCGTTTCCCCCTCCTCGGACCCACTTCCCCGTCACCCCGAACTCCGTCACTAATGGCGTCAACGTTAACGCTGGCCTCACCCACGATCTGCGAAAACTAGGGTTTCCCATAGAAGAAAAGAGCAACAAGGTCGATGGTTTCGTCCAGCAGCAAGAACTGAAGCTGCAGTTCGGGTCTTTGCCCACGGTTGCGTACTCTGCCTCTGAAGTTTCTCCCAATGTGGACTCGTTGCTCAATTTGAAGTTCAACAGAGGGTACAACGGGCTTGACAGGAACTTGCATGTCGATCACCCCACTTTAAATTCGAGTGGGAATGTGGTTCTTCAGGCTAATCATGATGTTGTGGACAGGGAAAGAAGAGGACTTGAGGGTTATACGGCTAGTGGGTCGTTGTCTCATGAGGCTAGTAGGGTTCCACCAGGGTTTGGGAACAGGAATAGAGGGAAGGGTTTGGAGGGTAGGAAAGATGGTAGGGTGGGGGGTGGTGAAATGGGTGGTGGAGGTAGGATTGAGAACTTGTATGGGAAGAGGGAAGGTGTGAGAATGGTGTCTGGTGAAAGGAGCAATGTTAGAGGCAATGTAGCTCGTGAAATGGGGCTTGTTGATCAGCTTGATCGCCCTGGGCCACCTGCTGGGAGTAACTTGCATTCCAGTGTAGTGAATGAGACTGGTGGAAGTGGCGCTCATGTTGATGTCCTTGGGGAGCAGTTGGCTGATTCATTGTTGGTAGAGGATGACTCTGATCCAAGGCAACGCCGCGCCACTCGAGAGAAGGATGCTAGATCATCGGATTCAAGAGGGCAGCAGATCCTAAGCCAGCGAGCAAGAACGTACAAAAGGCAGATAGTTTGTCGAAGGGATATTGATGTTTTTAATGTTCCTTTCCTTGCAATATATGAGTCTCTAATACCCCCTGAAGAAGAAAAGCTGAAGCAAAAGCAATTAGTGGCATTATTGGAGAAATTAGTTAGCAAAGAATGGCCAGCAGCTAAGCTTTATCTCTATGGATCATGTGCTAATTCGTTTGGTGTTTCTAAAAGTGACATTGATGTTTGCCTTGCTATTGAGGAAGCAGACTTGGACAAAGCTAAGATTATAATGAAACTGGCGGATATTTTTCAATCAGATAATCTGCAGAATGTGCAGGCATTGACGCGTGCACGGGTTCCAATAGTAAAGCTCATGGATCCAGTGACAGGAATCTCTTGTGACATATGCATTAACAATCTTCTAGCTGTTGTGAATACAAAGCTTCTTCAGGATTATGCACGCATAGATCCAAGGTTGCGGCAGCTAGCTTTCATTATTAAACATTGGGCTAAGTCAAGAAGAGTCAATGAAACTTACCATGGGACTTTGTCTAGCTATGCGTATGTTTTGATGTGCATTCATTATTTGCAAATGAGAAGACCTGCTATCCTTCCATGCTTGCAGGAGATGGAGACAACGTATTCTGTGACTGTGGATGATATTCATTGTGCTTTCTTTGATAAAGTTGAAAAACTTAGTGATTTTGGTCGCCATAACAAGGAAACAATTGCTCAGCTTGTGCGGGGATTTTTCCATTATTGGGCATATTGTCATGATTATGCAAATACTGTTATATCTGTACGCACAGGAAGCATAATCAGCAAACGAGAGAAGGACTGGACTAGAAGGATTGGCAATGATCGGCATTTGATATGTATAGAGGATCCTTTTGAAACATCTCATGATCTAGGGCGAGTGGTTGATAAATATAGCATCAAAGTTCTGAGGGAAGAGTTTGAACGTGCTGCTGAAGTTATGCAGAATGATCCAAATCCATGTTTTAAACTTTTTGAGCCCTATGTTCCCAGTTGA 2139 0.4755 MNGGGGDLPLPPQPSNGGEFLLSLIQRPHHSHPHPRQQSPAIDPAVAVVGPTIPVGAPQWPIAGADHPHPLPLPHQFPPWSHTLSSPLYPPNFFGLPHNPFPPPRTHFPVTPNSVTNGVNVNAGLTHDLRKLGFPIEEKSNKVDGFVQQQELKLQFGSLPTVAYSASEVSPNVDSLLNLKFNRGYNGLDRNLHVDHPTLNSSGNVVLQANHDVVDRERRGLEGYTASGSLSHEASRVPPGFGNRNRGKGLEGRKDGRVGGGEMGGGGRIENLYGKREGVRMVSGERSNVRGNVAREMGLVDQLDRPGPPAGSNLHSSVVNETGGSGAHVDVLGEQLADSLLVEDDSDPRQRRATREKDARSSDSRGQQILSQRARTYKRQIVCRRDIDVFNVPFLAIYESLIPPEEEKLKQKQLVALLEKLVSKEWPAAKLYLYGSCANSFGVSKSDIDVCLAIEEADLDKAKIIMKLADIFQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLQDYARIDPRLRQLAFIIKHWAKSRRVNETYHGTLSSYAYVLMCIHYLQMRRPAILPCLQEMETTYSVTVDDIHCAFFDKVEKLSDFGRHNKETIAQLVRGFFHYWAYCHDYANTVISVRTGSIISKREKDWTRRIGNDRHLICIEDPFETSHDLGRVVDKYSIKVLREEFERAAEVMQNDPNPCFKLFEPYVPS* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0904 712 Pfam Cid1 family poly A polymerase 612 670 IPR002058 -
Pvu10g0904 712 MobiDBLite consensus disorder prediction 1 20 - -
Pvu10g0904 712 MobiDBLite consensus disorder prediction 229 269 - -
Pvu10g0904 712 MobiDBLite consensus disorder prediction 301 326 - -
Pvu10g0904 712 PANTHER POLY A POLYMERASE CID PAP -RELATED 66 711 - -
Pvu10g0904 712 SUPERFAMILY PAP/OAS1 substrate-binding domain 526 698 - -
Pvu10g0904 712 Pfam TUTase nucleotidyltransferase domain 406 504 IPR045100 GO:0016779
Pvu10g0904 712 CDD NT_PAP_TUTase 412 522 - -
Pvu10g0904 712 MobiDBLite consensus disorder prediction 343 369 - -
Pvu10g0904 712 Gene3D Beta Polymerase, domain 2 411 524 IPR043519 -
Pvu10g0904 712 PANTHER UTP:RNA URIDYLYLTRANSFERASE 1 66 711 - -
Pvu10g0904 712 MobiDBLite consensus disorder prediction 343 363 - -
Pvu10g0904 712 Gene3D - 525 693 - -
Pvu10g0904 712 SUPERFAMILY Nucleotidyltransferase 395 522 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0904 Pvu-Chr10 32432667 32437796 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0904 - - gmx:100812787 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0904 10 32432667 32437796 Pvu10g0904 10 32432667 32437796 ECH