Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0900 ATGAATACCACGGCAGACTCCGCCACCGAGAGCGACGGTGGTGGGCCCCGGCCCACGATTAAGCTCAACGTTTGGTTTGGTTCCTCCAACCACGAAGTTCACCTCCCGGCCCAATCAACTTTCGGGGATGTCAAGAATTTGCTTGTCAATAAAACTGGTTTAGAGCCTGAACAGCAGCGACTTTTCTTCAGAGGGATAGAAAAGGGTGATAATCAGCATTTGCACCTCGAAGGTGTAAAGGACAAGTCAAAGATTTTTCTTTTGGAGGGAACTGCTAGCAAAGAGAGGAAAGCCGAGGAAACCAGAAAGCAAAATGAAATGTCTAAAGCTTTTGAGGCTATTACTGGTGTCAGAGCTGAGGTGGACAAGCTCTCAAATAGGGTGACTGCTATAGAAGTAGCTATGAATGCGGGGAATAAAGCTTCTGGGAAGAGTTTCTTATGTTGA 447 0.4676 MNTTADSATESDGGGPRPTIKLNVWFGSSNHEVHLPAQSTFGDVKNLLVNKTGLEPEQQRLFFRGIEKGDNQHLHLEGVKDKSKIFLLEGTASKERKAEETRKQNEMSKAFEAITGVRAEVDKLSNRVTAIEVAMNAGNKASGKSFLC* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0900 148 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 4 8 147 - -
Pvu10g0900 148 Gene3D - 19 89 - -
Pvu10g0900 148 SUPERFAMILY Ubiquitin-like 13 91 IPR029071 -
Pvu10g0900 148 Pfam Ubiquitin family 23 87 IPR000626 GO:0005515
Pvu10g0900 148 ProSiteProfiles Ubiquitin domain profile. 18 88 IPR000626 GO:0005515
Pvu10g0900 148 Gene3D BAG domain 91 148 IPR036533 GO:0051087
Pvu10g0900 148 PANTHER BCL2-ASSOCIATED ATHANOGENE 8 147 IPR039773 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0900 Pvu-Chr10 32300152 32302593 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0900 - - pvu:PHAVU_010G086300g 296.204