Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0893 GAAGTTGCACGCAGCAAAAAGGGAAGGTCAAAGCATTCACAGTGGAGGAACTATGATGATTTAAATGAATATTTCTGGTCTGCTTATTGTTTTCGGTTAGGTTGGCCAATGCGTGTTGATGCTGATTTCTTTTGCCTGCCTTCCGAAAACTCATTGTTTGATAAATCTAATGTAGTCAATTACGGAGCTATCATGGAGAATCGTGGGATGCAGTTTTACTTTGAAGACATGTGA 234 0.3974 EVARSKKGRSKHSQWRNYDDLNEYFWSAYCFRLGWPMRVDADFFCLPSENSLFDKSNVVNYGAIMENRGMQFYFEDM* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0893 77 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 6 35 IPR026899 -
Pvu10g0893 77 PANTHER CALLOSE SYNTHASE 3-RELATED 1 57 IPR026953 GO:0003843
Pvu10g0893 77 SMART FKS1_dom1_2 1 38 IPR026899 -
Pvu10g0893 77 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0893 Pvu-Chr10 32047428 32048346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0893 1 47 Glycosyltransferase AT5G13000 87.234 4.07e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0893 K11000 - pvu:PHAVU_010G0858001 170.629