Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0889 ATGGCGGATACCTCTTTTTTCTTTACTAACTTCACCGAACATTTTATGGAGAGAGATCTCTGGAAGGTTTTTCAAAGGTGGGGGAGGGTTTTGGACGTGTTTGTTTCAAGAAAACTCAATGCAAGGAATCAAAAGTTTGGCTTTGTAAGGTTTCAGGGTGTGAATGATGTTTTTTCTTTGGAAAGAGAGTTGGATGCAATCTGGATTGGCACATGGAAGCTGCAGGTGAACCTTCCCAAGTATCAAAGGAAGGATGGACCAAGGAAGCAGAGGAATGAAGGGTCTAGACTCGGGTGGAATCCAAAGCTGAACATAACGCATCCTAGGGAAGTAGGGGGTGCGAAGGGGAAACAGATGGAACAATTTTCGTTTGCTCAAGTTGTTTCTGAGGGCGTAGCCAAGAATGGAACAGGTGAGAATGCAAGCAGTTCTCTAGGGGACGAGTTAGCTTATCAGATTACAGTGGAGGTAAAACAGGATTCTTGGCTAGAAGGAAGCTTTGTTGGATGTTTTAAGGAGATTCCATGCTTGCAAGTGATTAAAGAGAGCTTTGTGATGGGAGGTTTTAGCCTAGTCAAATTGAGATATCTTGGAGGAAGGTTTGTTCTTCTATCATGTGATGAAGGAGGGAGTCTGCGAAAGATCATAGCAGATAACAGATCTTGGTTCGATGAAGTCTTTTCGACGGTTTCTCCTTGGGATGGTTCTTTTGTTCTGAAAGAACGCTGTGCATGGATACGCTGTAGAGGGATTGGAGGTCGTGGTGGGGGAGGTGTTGGAGATTGA 786 0.4427 MADTSFFFTNFTEHFMERDLWKVFQRWGRVLDVFVSRKLNARNQKFGFVRFQGVNDVFSLERELDAIWIGTWKLQVNLPKYQRKDGPRKQRNEGSRLGWNPKLNITHPREVGGAKGKQMEQFSFAQVVSEGVAKNGTGENASSSLGDELAYQITVEVKQDSWLEGSFVGCFKEIPCLQVIKESFVMGGFSLVKLRYLGGRFVLLSCDEGGSLRKIIADNRSWFDEVFSTVSPWDGSFVLKERCAWIRCRGIGGRGGGGVGD* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0889 261 PANTHER RNA RECOGNITION MOTIF 5 251 - -
Pvu10g0889 261 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 53 IPR000504 GO:0003723
Pvu10g0889 261 CDD RRM_SF 7 77 - -
Pvu10g0889 261 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 5 251 - -
Pvu10g0889 261 MobiDBLite consensus disorder prediction 83 103 - -
Pvu10g0889 261 SUPERFAMILY RNA-binding domain, RBD 7 94 IPR035979 GO:0003676
Pvu10g0889 261 Gene3D - 2 120 IPR012677 -
Pvu10g0889 261 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 81 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0889 Pvu-Chr10 31783093 31783878 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0889 - - pvu:PHAVU_003G099400g 421.009