Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0885 ATGGCTTCTCCGGAAGCCGATTCCCGTCTGAGTCTGGTCGTGGTCCCCGCGCTTGAGAAGATAATCAAGAATGCGTCGTGGCGGAAGCACGCCAAACTCGCTCATGAGTGCAAATCCGTCATCGAGAGGTTCGGCCACCAGCACCAGCACTTTCCGACGCCGGGATCTCCCTCCGACACCGAAGCGGAGGCCGCCGTCCCTGGCCCGCTCCATGACGGCGGTCCATTGGAGTTCTCCTTGGCAGAGTCCGAGTCTATCCTCGCGCCTTTCATCAATGCTGCCGGCTCCGGCGTCCTCAAGATCGCTGATCCTGCCGTCGATGCCATTCAGAAGCTCATTGCGCATGGCTTCCTCCGCGGCGAGGTGGACCCGGACCCGGACTCTGCGGCTGCGGCGCCGGAGGCGAAGCTCCTGTCCAACCTCATAGCATCGGTCTGCAAATGCCACGATTTCGGCGACGAGGCGATGGAGTTGCTGCTCCTCAAGACCTTGCTCTCCGCAGTGACGTCAATTTCGCTCCGCATCCACGGTGATTCCTTGCTTCTCATTGTGCGGACATGCTACGATATATATCTCGTGAGTAAGAATGTGGTGAATCAGACGACGGCGAAGGCGTCGCTGATCCAAATGCTGGTGATCGTGTTCCGCCGCATGGAGGCGGATTCCTCCACTGTGCCGATTCAGCCGATTGTAGTGGCGGAATTGATGGAGCCTGTGGAGAAATCCGATGGAGACAATTCAATGACGCAGTTTGTGCAGGGCTTTATAACGAAGATAATGCAGGACATTGACGGCGTTTTGAACCCTACGACGCCGAGTGGGAAGGTTAATTTGTTAGGTGGGCACGACGGTGCGTTTGAGACCACCACGGTGGAGACTACGAACCCTACTGATTTGTTGGATTCTACTGATAAAGACATGTTGGATGCTAAGTATTGGGAGATTAGTATGTATAAGACGGCGTTAGAGGGACGGAAGGGGGAGCTTGTGGATGGGGAAGTGGTGGAGAGAGACGATGATTTGGAGGTTCAGATTGGAAACAAGTTGAGGAGAGATGCTTTTTTGGTGTTTAGGGCGCTTTGTAAGTTGTCCATGAAGACGCCTCCGAAGGAGGTGGTAGGGGACCCGCAGTTGATGAAGGGGAAGATCGTTGCTCTGGAGTTGCTGAAGATTTTGCTGGAGAATGCTGGGGCCGTGTTCAGGACTAGTGAAAGGTTTTTAGGTGCCATCAAACAGTACTTATGTTTATCCTTGTTGAAGAACAGTGCTTCAACTCTTTTAATTGTATTTCAGCTGTCATGCTCCATTTTCATCAGTCTGGTGTCAAGATTTAGAGTTGGATTGAAAGCAGAAATTGGAGTATTTTTTCCTATGATAGTTCTCAGGGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGATGATAGTGCTTCGATTTCTGGAAAAGCTCTGTGTTGATTCACAGATATTGGTCGACATATTTATAAACTATGACTGTGATGTCAATTCATCCAACACATTTGAGAGGATGGTAAATGGACTCCTTAAAACTGCACAAGGTGTTCCTCCTGGTGTAACAACCACGCTTTTGCCACCCCAGGAAGCAACACTAAAACTTGAAGCCATGAAAAGCTTGGTCGCAGTTCTAAAATCAATGGGGAACTGGATGAACAAACAATTGCGCATTCCGGACCCTCGTTCAGCCAAGAAAGTTGAAGCATTGGATAACAGCCCTGAATCTGGAGGTTTTACCATGGTAAATGGGAATGGAGAAGACCCTCCTGATGGATCTGACACTCAATCAGAAGTCTCCAATGATGCTTCTGATGTTTCAAATATTGAGCAACGCCGGGCTTATAAACTGGAACTCCAGGAAGGTATATCACTTTTTAATAGGAGGCCTAAGAAAGGAATTGAGTTTCTCATCAATGCCAACAAGGTGGGTGATTCACCAGAGGATATAGCTGCTTTTCTTAAAGAAGCATCCGGGTTGAACAAGACTTTGATTGGTGATTACCTGGGAGAAAGAGAAGAGTTACCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTAACTTTCAAGGTATGGAGTTTGATGAGGCAATCAGGGTCTTTCTTCAAGGATTTAGACTGCCTGGTGAGGCACAGAAAATTGATAGGATCATGGAAAAGTTTGCTGAACGTTACTGCAAATGTAATTCAAAGGCCTTTTCTAGTGCTGACACAGCTTATGTTCTTGCCTATTCTGTTATAATGCTTAATACCGATGCTCACAATCCCATGGTGAAGAATAAGATGTCTCCTGATGATTTCATAAGAAACAATCGTGGCATTGATGATGGAAAAGATCTGCCTGAGGAATACTTGAAGTCCTTGTTTGACAGAATATCTAGAAATGAGATCAAAATGAAAGAAAATGATGCGGCTCCTCTACAAAAGCAGGCTGTGAACCCTAATCGACTTTTAGGCTTGGATAGTATATTGAATATTGTGATCCCCAAACGTGGTGAAGAGAATATGGAGACCAGTGACGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAGATCTGAATCAATTTATTATGCAGCAACAGATGTTGTAATCCTTAGATTCATGATTGAGGTGTGCTGGGCACCGATGTTAGCCGCCTTCAGTGTTCCTCTTGATCAAAGTGACGATGAGGTTGTAATATCTCTGTGTCTTGAAGGTTTCCGCCATGCGATTCATGTTACTTCAGTAATGTCGATGAAGACTCATAGAGATGCTTTTGTGACGTCATTAGCAAAGTTTACCTCACTACATTCACCGGCAGATATTAAGCAGAAAAATGTCGATGCGATTAAGGCAATAGTTGTTATTGCTGATGAAGATGGAAATTACTTACAAGAAGCTTGGGAACATATCTTGACTTGCGTTTCTCGGTTTGAGCATTTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCATTTCCTCAGAATGATTCAGAAAAAACAAAGCAAGCAAAGTCAACCATTCTTCCTGTTTTGAAGAAGAAGGGACTTGGGAGGATGCAGTATGCAGCTGCTTCATTGATGCGGGGTTCATATGATAGCACTGGAATTGGTAGTACTGGTTCTGGAGTCACATCAGAACAGGTGAACAGTCTAGTTTCTAATTTAAATATGTTGGAACAAGTTGGAAACTCTGAAATGAGTCGCATATTCACTCGGAGTCAGAAGTTGAACAGCGAGGCCGTAATAGATTTTGTTAAGGCTCTGTGCAAGGTCTCCATGGAGGAACTGAGGTCTCCATCTGATCCACGTGTTTTTAGCCTTACAAAGATTGTTGAGATTGCGCACTACAATATGAACCGCATAAGACTTGTGTGGTCAAGCATCTGGCTTGTTCTCTCTGATTTCTTTGTAACTATTGGTTGTTCTGCAAACCTTTCAATTGCCATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTGGAGCGGGAAGAGCTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAGAGCTGTTGAAATTAGAGAATTAATTATCAGATGTATCTCTCAAATGGTTCTATCTCGTGTAAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCTTACGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATGATTGAGAAGATTATTCGCGATTACTTCCCATGCATCACTGAGACTGAGACTACAACCTTCACAGACTGCGTAAATTGTCTAATTGCGTTTACCAATAGTAGATTCAATAAAGAGATTAGCCTAAATGCCATTGCTTTTCTTCGGTTTTGCACCACAAAACTTGCAGCGGGAGACCTTGGCTCATCATCAAGGAATAAGGATAAGGAACTTTCTGGAAAGGTTTCCCCATCTTCACTTCAATCAAGGAAGGAGGGGAAAAATGAAAATGGAGAGGCTGCTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTTTATCTGAGCTTAGCTTTGACCCAAGACCTGAGATTAGGAAGAGTGCCTTGGATGTCCTGTTTGAAACCTTACGTAACCATGGCCATCTCTTTTCGCTAAATTTATGGGAAAGAGTATTTGAGTCTATCTTATTTCCAATATTCGATTACGTTCGACATGCTATTGATCCTTCAGGGAGTAGTTCACCAGTAAATGAAGTAGAGGCAGATGATGGTGAGCATGATTCAGATGCTTGGCTTTACGAGACATGCACATTGGCCCTCCAATTGGTTGTAGATCTTTTTGTTAACTTTTACAACACTGTCAATCCACTTTTAAGAAAAGTGCTGTTGCTCCTGGTTAACTTTATAAATCGCCCTCATCAAAGCCTTGCAGGCATTGGTATTGCGGCTTTTGTTCGTTTGATGAGTAATGCGGGGGAGCTATTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTCTCATTAAAAGAAGCAGCAAAGGCAACACTTCCTAACTTTTATTTTCTGGAAAGCGAGGACTTCACTAGAAGTCATGAGGATACTTCAATCACTGATGATAGAGATGTTGCTGAATCTGGCTTTCCAGATAATTTAGTCAACTTGAGGACTCGTCGTGTTTATGCTCACTTAACTGATGCAAAATGCCGAGCTGCTGTTCAGCTTTTATTGATTCAGGCGGTGACGGAGATCTATGCCATGTATCGTTCTCACCTTCCAGCAAAAGCCATGCTAGTCCTGTTTGATGCTTTGCACGCTATAGCGTTACACGCGCATCAGATTAACAACAATACCATATTACGTTCAAAGCTTCAAGAGTTTGGTTCTATGAGCCAAATGCAAGACCCTCCACTCTTACGCCTTGAGAATGAATCGTACCAGATCTGCCTTACATTTTTACAAAACCTTGTCGTTGACAAGCCTCCTAGCTATGAAGCGGATGAGGTTGAATCTCATCTCATTCAGCTTTGTCAGGAGGTTTTGGAGTTTTATATTGAAGTTGCAGGTTTTGGACAAAAATCTGAATCTTCTCATGTTCGAGAGCCACATTGGTATATTCCCTTGGGCTCCGGGAAGAGTAGAGAATTGGCTTCTCGTTCACCTCTCATTGTGGCTACTCTGCACGCTATTTGTAGTTTGGGAGATATTTCCTTTGAGAAGAACCTGTCTCATTTCTTCCCTCTTATTTCTAGCTTGGTACGTTGTGAACATGGCTCCAAGGAAGTCCAGGTTGCTCTCAGTGACATGCTTACTTTATCAGTTGGTCCTGTTTTGCTACAGTCATGTTGA 5361 0.44 MASPEADSRLSLVVVPALEKIIKNASWRKHAKLAHECKSVIERFGHQHQHFPTPGSPSDTEAEAAVPGPLHDGGPLEFSLAESESILAPFINAAGSGVLKIADPAVDAIQKLIAHGFLRGEVDPDPDSAAAAPEAKLLSNLIASVCKCHDFGDEAMELLLLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLVSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMEPVEKSDGDNSMTQFVQGFITKIMQDIDGVLNPTTPSGKVNLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEVVGDPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRVGLKAEIGVFFPMIVLRVLENVSQPNFQQKMIVLRFLEKLCVDSQILVDIFINYDCDVNSSNTFERMVNGLLKTAQGVPPGVTTTLLPPQEATLKLEAMKSLVAVLKSMGNWMNKQLRIPDPRSAKKVEALDNSPESGGFTMVNGNGEDPPDGSDTQSEVSNDASDVSNIEQRRAYKLELQEGISLFNRRPKKGIEFLINANKVGDSPEDIAAFLKEASGLNKTLIGDYLGEREELPLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNSKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSPDDFIRNNRGIDDGKDLPEEYLKSLFDRISRNEIKMKENDAAPLQKQAVNPNRLLGLDSILNIVIPKRGEENMETSDDLIRHMQEQFKEKARRSESIYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVVISLCLEGFRHAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKAIVVIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKQAKSTILPVLKKKGLGRMQYAAASLMRGSYDSTGIGSTGSGVTSEQVNSLVSNLNMLEQVGNSEMSRIFTRSQKLNSEAVIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWLVLSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSRAVEIRELIIRCISQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEMIEKIIRDYFPCITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCTTKLAAGDLGSSSRNKDKELSGKVSPSSLQSRKEGKNENGEAADKDDHLYFWFPLLAGLSELSFDPRPEIRKSALDVLFETLRNHGHLFSLNLWERVFESILFPIFDYVRHAIDPSGSSSPVNEVEADDGEHDSDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLLLLVNFINRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVFSLKEAAKATLPNFYFLESEDFTRSHEDTSITDDRDVAESGFPDNLVNLRTRRVYAHLTDAKCRAAVQLLLIQAVTEIYAMYRSHLPAKAMLVLFDALHAIALHAHQINNNTILRSKLQEFGSMSQMQDPPLLRLENESYQICLTFLQNLVVDKPPSYEADEVESHLIQLCQEVLEFYIEVAGFGQKSESSHVREPHWYIPLGSGKSRELASRSPLIVATLHAICSLGDISFEKNLSHFFPLISSLVRCEHGSKEVQVALSDMLTLSVGPVLLQSC* 1787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0885 1786 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 221 IPR032629 -
Pvu10g0885 1786 CDD Sec7 621 803 IPR000904 GO:0005085|GO:0032012
Pvu10g0885 1786 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 10 1779 - -
Pvu10g0885 1786 MobiDBLite consensus disorder prediction 47 68 - -
Pvu10g0885 1786 Gene3D - 613 695 - -
Pvu10g0885 1786 MobiDBLite consensus disorder prediction 1310 1342 - -
Pvu10g0885 1786 MobiDBLite consensus disorder prediction 595 613 - -
Pvu10g0885 1786 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 350 507 IPR032691 -
Pvu10g0885 1786 SUPERFAMILY Sec7 domain 618 809 IPR035999 GO:0005085|GO:0032012
Pvu10g0885 1786 ProSiteProfiles SEC7 domain profile. 614 801 IPR000904 GO:0005085|GO:0032012
Pvu10g0885 1786 Gene3D - 696 816 IPR023394 -
Pvu10g0885 1786 Pfam Domain of unknown function (DUF1981) 1170 1252 IPR015403 -
Pvu10g0885 1786 MobiDBLite consensus disorder prediction 568 613 - -
Pvu10g0885 1786 SUPERFAMILY ARM repeat 385 1517 IPR016024 -
Pvu10g0885 1786 Pfam BIG2 C-terminal domain 1577 1774 IPR046455 -
Pvu10g0885 1786 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 10 1779 - -
Pvu10g0885 1786 Pfam Sec7 domain 622 803 IPR000904 GO:0005085|GO:0032012
Pvu10g0885 1786 SMART sec7_5 618 803 IPR000904 GO:0005085|GO:0032012
Pvu10g0885 1786 Pfam C-terminal region of Mon2 protein 1351 1412 IPR032817 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0885 Pvu-Chr10 31691162 31705669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0885 K18442 - gmx:100778814 3148.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0769 8 7155068 7169301 Pvu10g0885 10 31691162 31705669 PCT