Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0873 ATGGATCACGGGAAAAATGTTGCTTCAAATTCATCAGGTTCTTATCGAGAGTTCACGAAGTGGACGGCGGAGATGGACCTAATTTTGCTCAATGCAATGATTGATGAGGTACGAAAATGGTGTACAATTGATGGTAGCTTGACCACTCAAGGATACACCAACATAGTTATGGCTTTAAATGAGGCTGGTTTATCGGGTATTAAGAAAAATCATGTGAAGAACCTCCAGAAAAGCCTCAAGGACAGGTGGAGGGAAGTCCATGATTTGTTTGGTGGATTGAGTGGTTTCGCATGGAACCAGACCACCAAATTTTTTGAAGCCGAGGACGAAGTTTGGAGTGAGCTGATTAAGGTTAAACCATTTGCAGCGAAATGGCGTGTGAATCCCATTCGCCATTATGACCTCATGGAGGAGTTGTGGTCTAATGATAGAGCCACGGGAAGTCGGGTCAGGACAGCCCGTGACATCAATTCACCTCCTGACATGAGCAATTTCAGTGTCAACCTTGGGGACAATAATATGGATTATATTCCCGAGCAACCGAACTATGAGGAGGCAGATGACTACGTCCCACAATCACCTGCTCCTCAATTCCAATCTAGTGACAGTCCTTCAGACACACCGTCAAACACTCCTTCTATGTCATCTGTTGGCTCTGCGGGCACATCCTCATCTCGAGGATCAAAGAGAAAAGGCCCTACTATGGACGACATTGATGAACATTTTGCAATGTTGAATACTAATCTTCAACAATGCGTGTCATCAATGAAGGATGGAAATGAAAATGCCTCTCAGTTGGTGAATATTGCTCGTGCACAGGCAACGACAACTCAAGATATAGCTGCCGAAATTAGACGAAGAAACGACCTATATGTTGAGCATGTACACCACCATCGACGCCATGCCACATACCAGTACTCAGAGTCTGATATTTGGGCAATGCTCGTGGAGCTTAACATTCAAGATGAACAACTCATGGATCAATGCTACAAGTTTTTATGTGACCATCCCGGAAGACCAGCAACGAGGATTGAACAAGTTCTTGATTATTCAAGATACTTTAGTACAAGACATCAAATGGTGGTGTTTGAAAAAAAGTTTCACGCAAGACCTGTATTACCACCAAAAGTTATGCATACTCCATTGTTTGCTGCTCCAGGATTTGAATTCCAAAATGTTCTGAATTGGCAAGGTTTACAACCTTTCTTTGGAATTAATCTTCCGTATTATGAGGACTTGGTAAGAGTATTTTATACAAATGTAAAAATCACACCTGTTGGTCACCTTGCCATTGAGATTTGCGGAAGGATGATACACATTAAAGAAATGTATTGGATGACCATTGCTCATCTACAGTATGACGGTCTTAGGTTAACCCCTGGGACAATCCCTGAGGAACTGAATTTTGATCAAGCACTGACATTATCGTCCATGATTCGTAAAGATGTTGAAGTGCATATCTTGTGCCCTCGTGGAAGCAACTTTGCACAACTACTGAATGAAGATATTATCATGTTGTGGTTAATAAAAAATAATGTACTCATTAATTGGCCTCATTACATCATGCAACACATCATCAAATGTCGGGATAACAAGATGCCTCTCCCATATGCAAATTTGATAACGAGGATCTTGCAAGCTGGAATCATTACTTTGGGAAAAAAAAGTATGACAAAATTAAATATATTCCAGGTCAATGGCGTAAGGAAACTTGGTAGGCCTCACCATGCACACGAAGAAGATGATGAAGAGGATGAATTGCCAGCACAAGATGTTGAAGGTGGTCAACTTGAGGCGGCAATCCCCAATCAAACCGAATTGTTAACCCAAATTTTGTCCGGGATACGAAACATGAATACCCGCATTGACAGGGTTGATCAAAGGATAGACCGAGTTAAGGATACTCTGAATGACATTCGACGTCATCAAGGCCATTGA 1938 0.4185 MDHGKNVASNSSGSYREFTKWTAEMDLILLNAMIDEVRKWCTIDGSLTTQGYTNIVMALNEAGLSGIKKNHVKNLQKSLKDRWREVHDLFGGLSGFAWNQTTKFFEAEDEVWSELIKVKPFAAKWRVNPIRHYDLMEELWSNDRATGSRVRTARDINSPPDMSNFSVNLGDNNMDYIPEQPNYEEADDYVPQSPAPQFQSSDSPSDTPSNTPSMSSVGSAGTSSSRGSKRKGPTMDDIDEHFAMLNTNLQQCVSSMKDGNENASQLVNIARAQATTTQDIAAEIRRRNDLYVEHVHHHRRHATYQYSESDIWAMLVELNIQDEQLMDQCYKFLCDHPGRPATRIEQVLDYSRYFSTRHQMVVFEKKFHARPVLPPKVMHTPLFAAPGFEFQNVLNWQGLQPFFGINLPYYEDLVRVFYTNVKITPVGHLAIEICGRMIHIKEMYWMTIAHLQYDGLRLTPGTIPEELNFDQALTLSSMIRKDVEVHILCPRGSNFAQLLNEDIIMLWLIKNNVLINWPHYIMQHIIKCRDNKMPLPYANLITRILQAGIITLGKKSMTKLNIFQVNGVRKLGRPHHAHEEDDEEDELPAQDVEGGQLEAAIPNQTELLTQILSGIRNMNTRIDRVDQRIDRVKDTLNDIRRHQGH* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0873 645 PANTHER EXPRESSED PROTEIN 9 317 - -
Pvu10g0873 645 Coils Coil 615 642 - -
Pvu10g0873 645 MobiDBLite consensus disorder prediction 151 175 - -
Pvu10g0873 645 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 9 317 - -
Pvu10g0873 645 MobiDBLite consensus disorder prediction 151 236 - -
Pvu10g0873 645 Pfam Myb/SANT-like DNA-binding domain 20 114 IPR024752 -
Pvu10g0873 645 MobiDBLite consensus disorder prediction 193 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0873 Pvu-Chr10 31386942 31389379 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0873 - - pvu:PHAVU_008G129400g 1015.76