Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0868 ATGAAGCTCGTTTGGTCCCCAGAAACAGCCTTAAAAGCTTACATAGACACCGTTAAATCATGTGAGAAATTCAAGGAATCGGGGGTACCGGAGTTGCTGTCAGCCATGGCTGCAGGATTTAACACAAAGTTCATAGTGGAATCATGGTGCTGCGGTGGTCCTATAGCCGCAAGCGTAGGCTTAGCAGTTGCAGCTCGCAACACGGGTGCAAGGCACGTGTGCATAGTCCCGGATGAACAGTCAAGGCTGCAGTACATAAAGGCCCTGGAGGAGATGGGGGTGTCTCCGCCGCCGGAGGTGGTGTCGGGGGAGGCGGAGGCGGCGGTGTCGCGGCTGGCGGGGCTGGACTTTCTGGTGGTGGATTGCAAGAGGAGGGAATTCGCTAGGATTCTAAGGGTGGCCGAAGTTAGTCCTAAAGGAGCAGTTTTAGCATGCAAGAACGCATTGCAGAGAAATTTGCGTGGCGGGTTCAGATGGAGCGTGGTGCTCCAAAGGGGTGTGCGAGTGGTTAGGTCAGTGTTTCTCCCTGTTGGGAAGGGTTTGGATATTGCATACATAGGAGGTTGTAGAAGTGGTGCACCACCACCACCACAAACAACCGCATCAAAGAGTCCTTGCCGTTGGATCAAACACATAGATCAGCAATCAGGAGAAGAACACCTCTTCAGAGAGTGA 675 0.5319 MKLVWSPETALKAYIDTVKSCEKFKESGVPELLSAMAAGFNTKFIVESWCCGGPIAASVGLAVAARNTGARHVCIVPDEQSRLQYIKALEEMGVSPPPEVVSGEAEAAVSRLAGLDFLVVDCKRREFARILRVAEVSPKGAVLACKNALQRNLRGGFRWSVVLQRGVRVVRSVFLPVGKGLDIAYIGGCRSGAPPPPQTTASKSPCRWIKHIDQQSGEEHLFRE* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0868 224 PANTHER ANKYRIN REPEAT/KH DOMAIN PROTEIN (DUF1442) 1 223 - -
Pvu10g0868 224 Gene3D Vaccinia Virus protein VP39 7 186 IPR029063 -
Pvu10g0868 224 PANTHER DUF1442 FAMILY PROTEIN 1 223 IPR009902 -
Pvu10g0868 224 Pfam Protein of unknown function (DUF1442) 1 223 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0868 Pvu-Chr10 31138346 31139536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0868 - - gmx:100794419 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0868 10 31138346 31139536 Pvu10g0868 10 31138346 31139536 ECH