Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0859 ATGGAAGGAGCCATTTATGATGGAGACATGTTCAAGTTGACTACGAAAAACTATTCCTATTGGAAGCTCATGATGGAGGATCACTTATACTGTAAGGATATGCATGAGCCCATTACTTGCATAACCAAGCCAAAAGGTAAAAGTGATAAAGATTGGGAACTTTTGAATCGAAAAACTGTTGCAATGATTCAAAAGTATATTGATAGAAATTTGTTTGAGCATCTTGAATCTATGATTCAAAAGAAAACTCCAAGAAATAAAGCATATCTTGTAAGAAGACTAGTGAAACTTGACTACACAGATGGTCAAAGTATGATAGAGCACTTGAATTCATTCAAGGGTTTTGTCAATCAATTGACGAAGATAGATATGAAGATTGATGATGAGTTGCAGGCACTTTTGCTACTCAGTTCGTTGCCTGAGAGTTGGGACACACTAGTAGTCACGCTCAGCAACTCAGTCCCAGATGGGAAGATCTTAATGGACACTGTTTCAAACACTCTGTTGAGTGAAGACTCTAGAAGGAAAGAAAGAGGTACAAATTTTCAAAATGAAGTAAATATGATTGAAACCCGTGGGAGAAATGAATCCTGTGAAAGAAACAAAAGCAAAGCCAAAAGTCGTTTTCAATCTCGCACAAGAACAAAATGCTATTATTGTAGCAAAGAA 669 0.3647 MEGAIYDGDMFKLTTKNYSYWKLMMEDHLYCKDMHEPITCITKPKGKSDKDWELLNRKTVAMIQKYIDRNLFEHLESMIQKKTPRNKAYLVRRLVKLDYTDGQSMIEHLNSFKGFVNQLTKIDMKIDDELQALLLLSSLPESWDTLVVTLSNSVPDGKILMDTVSNTLLSEDSRRKERGTNFQNEVNMIETRGRNESCERNKSKAKSRFQSRTRTKCYYCSKE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0859 223 Pfam gag-polypeptide of LTR copia-type 69 177 - -
Pvu10g0859 223 PANTHER ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATED 14 220 - -
Pvu10g0859 223 PANTHER - 14 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0859 Pvu-Chr10 30754805 30755510 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0859 - - pvu:PHAVU_010G082600g 442.195