Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0854 ATGGAAGTGGGTATGCTTCCAATCTCAGCTTCAAAGAGAGGAAAACTCTTGGCTGCTGGTTACACCTCTCTCGATGCCATTGCTCGTACCTCCGCCTCCCTCCTTGCTCGAGATATTGAAGTTTCTGATAGTGAAGCCTGTGAAATTCAGAATCTTGCAGCCAAAGCTGGTGCTTTGGAGACACCAAATGGGACTCACACTACTGTTGTTGGTGGTGGTCAGACTGCCTGGGATATGCTCAATGATGAGAAGTTTTCTTCTTACATTACCACATCTTGTGTGGATCTGGATAACATCCTTGGTGGAGGAATTAAGTGTAAAGATGTCACTGAAATAGGCGGAGTTCCAGGCATTGGTAAAACACAAATTGGGATTCAACTTGCGGTAAATGTTCAGATTCCTCAAGGATACGGTGGCCTAGGTGGGAAGGCAATATACATTGACACAGAAGGAAGCTTTATGGTTGAACGTGTTCTTCAAATTGCTGAAGCATGCATAGAAGACATGGCTGAATATAGCAACCACTTTCACAAGGATTTTCAAGCTTGTGAAGTTAAAATGCACCCTAATAACATCTTGGAAAATATATTCTATTTTCGTGTTTGCAGCTACACTGAGCAAATCGCCTTGATAAATTACTTAGACAAATTCATCATGGAGAATAAAGACGTAAAGATCATCATTGTCGATAGTGTGACTTTCCACTTCCGCCAAGACTTCGATGATATGGCTCTCAGGACTCGATTACTCAGTGAAATGGCTTTGAAGTTGATGAAGCTTGCAAAAAAATTCTGTTTGGCTGTTGTTATGCTGAATCAAGTAACAACCAAGTTCATTGAAGGTTCATTTCAATTGACTCTTGCACTAGGAGATAGCTGGTCACATTCATGCACAAATAGGATCATATTATTTTGGAATGGCAATGAACGACATGCCTTTATTGACAAGTCCCCTTCTCTTAAATCAGCATCAGCTCCATATTCTGTGACCAGTAGGGGCATAAGAAATTCTATTTCAAGCTGCAAAAGGATCAAGATGATGTGA 1044 0.4109 MEVGMLPISASKRGKLLAAGYTSLDAIARTSASLLARDIEVSDSEACEIQNLAAKAGALETPNGTHTTVVGGGQTAWDMLNDEKFSSYITTSCVDLDNILGGGIKCKDVTEIGGVPGIGKTQIGIQLAVNVQIPQGYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMAEYSNHFHKDFQACEVKMHPNNILENIFYFRVCSYTEQIALINYLDKFIMENKDVKIIIVDSVTFHFRQDFDDMALRTRLLSEMALKLMKLAKKFCLAVVMLNQVTTKFIEGSFQLTLALGDSWSHSCTNRIILFWNGNERHAFIDKSPSLKSASAPYSVTSRGIRNSISSCKRIKMM* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0854 347 CDD Rad51_DMC1_radA 89 335 IPR033925 GO:0003677
Pvu10g0854 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 335 IPR027417 -
Pvu10g0854 347 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 347 - -
Pvu10g0854 347 Pfam Rad51 74 336 IPR013632 -
Pvu10g0854 347 PIRSF Rad51 1 340 IPR016467 -
Pvu10g0854 347 Gene3D - 69 338 IPR027417 -
Pvu10g0854 347 ProSiteProfiles RecA family profile 1. 85 274 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0854 Pvu-Chr10 30391109 30394641 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0854 K10870 - gmx:100527406 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0854 10 30391109 30394641 Pvu10g0854 10 30391109 30394641 ECH