Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0849 ATGCTACTCTCTCTCTTTACAATGGCGTCTCCATCAACACTTTCGCGTATAAAGCTCTTACCAAAGCCACCTTCGCTTTTCTCCGCACTCACCACTCTCCGTCGAAACCAACTTCCACTCAAATCGTCGTTTACTGCATCTTCCTGCGCAACCCTCTCTGCTTCAAAACGCCACGCCGATGTCGTCGTTTTAGGCATCGAAACTAGCTGCGACGACACCGCCGCAGCTGTCGTGAGAAGCGACGGTGAGATTCTGAGCCAAGTGGTGTCATCTCAGGCAGATCTGCTTGCAAAATACGGAGGCGTTGCCCCGAAAATGGCAGAAGAAGCTCACTCACAAGTGATAGACCAGGTTGTGCAAGAAGCCCTTCATAAAGCTTATATGACTGAGAAAGATCTCACTGCTGTTGCTGTTACTATTGGTCCTGGCTTGGGTCTCTGCCTTCGTGTGGGGGTTCGGAAAGCTCGGAGAATTGCTGGTGGATTTAATTTACCAATTATTGGCATACATCACATGGAGGCTCATGCTCTGGTTGCCAGGTTAATTGAGAAAGATTTGCAGTTTCCATTCATGGCCCTACTTATTTCAGGGGGGCACAATTTACTCATTCTTGCACGCGATCTTGGACAATACATACAACTTGGAACTACAATAGATGATGCTATTGGTGAGGCATATGACAAAACAGCAAAATGGCTTGGACTAGATTTGAGGAGAAGTGGTGGTCCTGCTATTGAGAAGCTTGCTAAGGAGGGAAATGCTGAATCAGTCAAGTTTTCTATTCCAATGAAGCAGCACAAAGATTGCAACTTCTCCTATGCTGGTCTTAAAACCCAAGTACGGCTGGCAATTGAGTCCAAAAAGATTGATGCCCAAATTCCAATCTCTTCGGCAAGTAATGAAGATAAACTGTCTCGGGCTGATATTGCTGCTTCTTTTCAGCGAATTGCTGTGTTACATCTTGAAGAAAGGTGTGAACGAGCAATACAGTGGGCATTGAAGATGGAGCCTTCTATAAGACACTTGGTTGTCTCTGGTGGTGTTGCATCAAATCAATTTGTCCGAGCCCGGCTTGATATGGTTGTGAAAAAGAATGGCCTGCAACTTTTATGCCCTCCTCCTCGGCTCTGTACTGATAATGGTGTAATGATTGCTTGGACTGGTATTGAGCATTTCCGCATGGGAAGATATGACCCTCCTCCGCCTGCCGAAGAACCCGAAGACTTTGTGTATGATATACGTCCAAGGTGGCCGCTGGGAGAAGAATATGCTGAAGGAAAAAGTGAAGCACGTTCCTTAAGAACCGCCCGAATTCATCCATCTCTTACATCTATAATTCAAGCATCATTGCAACAGTGA 1359 0.4606 MLLSLFTMASPSTLSRIKLLPKPPSLFSALTTLRRNQLPLKSSFTASSCATLSASKRHADVVVLGIETSCDDTAAAVVRSDGEILSQVVSSQADLLAKYGGVAPKMAEEAHSQVIDQVVQEALHKAYMTEKDLTAVAVTIGPGLGLCLRVGVRKARRIAGGFNLPIIGIHHMEAHALVARLIEKDLQFPFMALLISGGHNLLILARDLGQYIQLGTTIDDAIGEAYDKTAKWLGLDLRRSGGPAIEKLAKEGNAESVKFSIPMKQHKDCNFSYAGLKTQVRLAIESKKIDAQIPISSASNEDKLSRADIAASFQRIAVLHLEERCERAIQWALKMEPSIRHLVVSGGVASNQFVRARLDMVVKKNGLQLLCPPPRLCTDNGVMIAWTGIEHFRMGRYDPPPPAEEPEDFVYDIRPRWPLGEEYAEGKSEARSLRTARIHPSLTSIIQASLQQ* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0849 452 Gene3D - 189 372 - -
Pvu10g0849 452 Hamap tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 61 419 IPR022450 GO:0002949
Pvu10g0849 452 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 64 77 IPR017861 -
Pvu10g0849 452 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 136 156 IPR017861 -
Pvu10g0849 452 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 176 IPR017861 -
Pvu10g0849 452 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 191 203 IPR017861 -
Pvu10g0849 452 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 214 235 IPR017861 -
Pvu10g0849 452 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 342 351 IPR017861 -
Pvu10g0849 452 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE 58 431 IPR000905 -
Pvu10g0849 452 TIGRFAM gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 64 385 IPR017861 -
Pvu10g0849 452 Pfam tRNA N6-adenosine threonylcarbamoyltransferase 83 386 IPR000905 -
Pvu10g0849 452 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED 58 431 IPR022450 GO:0002949
Pvu10g0849 452 Gene3D - 63 394 - -
Pvu10g0849 452 SUPERFAMILY Actin-like ATPase domain 63 387 IPR043129 -
Pvu10g0849 452 TIGRFAM T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 63 392 IPR022450 GO:0002949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0849 K01409 - gmx:100784367 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0849 10 30297209 30309179 Pvu10g0849 10 30297209 30309179 ECH