Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0836 GGATATCCATCACCTCTCAATTACAATTTCTTCCCTAAATCTTGCTGCACGTCAGTTAATGAAGTAATCTGCCATGGAATTCCTGACGCGAGGAAGCTTGAGGATGGTGACATTGTAAATGTTGATGTCTCTGTGTACTATAAAGGTGTTCATGCTGATCTCAATGAAACATACTTTGTGGGAAACATTGATGAAGAGTCTTGCCAATTGGTAAAATGCACATATGAGTGCCTGGAGAAGGCAATATCCATTGTTAAACCTGGGATACGGTTTCGCGAAATTGGTGAAGTTATTAGTCGTCATGCTTCAGTGTCTGGCTTCTCAGTGGCAAGATCATATTGTGGTCATGGAATTGGAGAGCTCTTCCATTGTGCACCAAACATTCCTCATTATGCTAGAAATAAAGCAGTTGGTGTGATGAAGGCTGGACAAACCTTTACAATTGAACCAATGATCAATGCTGGTGTCTGGCGTGATCGAATGTGGCCTGATGGATGGACTGATGTTACAGCCGATGGTAAACGAAGTGCTCAATTTGAGCATACTCTTCTGGTGACAGATACTGGTGTTGAAGTTTTAACAGGGAGGTTGCAGACATCACCAAGTGTTTTTCCTTGGCTAAATTCATAA 630 0.419 GYPSPLNYNFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVSVYYKGVHADLNETYFVGNIDEESCQLVKCTYECLEKAISIVKPGIRFREIGEVISRHASVSGFSVARSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWTDVTADGKRSAQFEHTLLVTDTGVEVLTGRLQTSPSVFPWLNS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0836 209 Pfam Metallopeptidase family M24 8 187 IPR000994 -
Pvu10g0836 209 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 113 131 IPR002467 GO:0006508|GO:0070006
Pvu10g0836 209 CDD MetAP1 1 194 IPR002467 GO:0006508|GO:0070006
Pvu10g0836 209 SUPERFAMILY Creatinase/aminopeptidase 2 195 IPR036005 -
Pvu10g0836 209 PRINTS Methionine aminopeptidase-1 signature 15 28 IPR001714 -
Pvu10g0836 209 PRINTS Methionine aminopeptidase-1 signature 37 53 IPR001714 -
Pvu10g0836 209 PRINTS Methionine aminopeptidase-1 signature 107 119 IPR001714 -
Pvu10g0836 209 PRINTS Methionine aminopeptidase-1 signature 138 150 IPR001714 -
Pvu10g0836 209 PANTHER METHIONINE AMINOPEPTIDASE 1 1 202 - -
Pvu10g0836 209 PANTHER METHIONINE AMINOPEPTIDASE 1 202 - -
Pvu10g0836 209 Gene3D Creatinase/methionine aminopeptidase superfamily 1 205 IPR036005 -
Pvu10g0836 209 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 2 195 IPR002467 GO:0006508|GO:0070006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0836 Pvu-Chr10 29939865 29947844 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0836 K01265 - gmx:100785022 419.083