Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0829 ATGTTCATAACCCTTCAATTAGACTCAACTCATATAATCATTTTAGCTTTGAAACTCTCATATCTTCTATTTCTCTTTTCTTCAATTCCTAATGCCCTAGGCTACACTACTAGAGCTCATATCTTCATTTATGCTGGGTGCTCTCAAGAAAAATACCAACAAAACACACCCTTTGAAGCCAACCTCAATTCCTTTCTGTCTTCAGTTTCTGGCTCATCTTCTGACAATTCTTACAATAGCTTTGCTATTGGAAATGGAAGCTCATCACCACCAGAAGGATCCATATATGGCTTATACCAGTGCAGGAGTGATTTGAGGCCAAATGATTGCTCAAAATGTGTTAAAAGTTGTGTTAACCAAATAGGCTTGGTTTGTCCCTTGGCACTTGGGGCATCTTTGCAACTTGAAGGCTGTTATATAAGATATGAGCATGCTGATTTCCTTGGAAAACCTGACACAAGCCTTTGGTACAAGAAGTGCAGTAAAGCAGTGACAAATGATGCTGAGTTCTTCAGGCGTAGAGATGATGTTCTTTCTGATTTACAAGCAGCTAATGGATTTGGAGTCAGTACTTCTGGTTTTGTTGAAGGGTTTGCACTGTGTTTGGGAGATCTGAATGTGGCTGATTGCTCCTCATGCCTTCAAGCAGCAGTGGGACAGCTTAGGAGCATATGTGGTTCAGCAGCATCAGCTGATGTGTTCTTGGCACAATGTTATGCTCGGTACTGGGAAGCTGGCTACTATGATGAAGCAGAATCTTCTAATGAGGATGACCAAGTGGGGAAATCAGTTGCCATTATTGTGGGAGTTCTTGCTGGTCTAGCCATTCTTGTTGTCCTTCTCTCAATCTTCAGAAGAGCATTTGGTTAA 870 0.4138 MFITLQLDSTHIIILALKLSYLLFLFSSIPNALGYTTRAHIFIYAGCSQEKYQQNTPFEANLNSFLSSVSGSSSDNSYNSFAIGNGSSSPPEGSIYGLYQCRSDLRPNDCSKCVKSCVNQIGLVCPLALGASLQLEGCYIRYEHADFLGKPDTSLWYKKCSKAVTNDAEFFRRRDDVLSDLQAANGFGVSTSGFVEGFALCLGDLNVADCSSCLQAAVGQLRSICGSAASADVFLAQCYARYWEAGYYDEAESSNEDDQVGKSVAIIVGVLAGLAILVVLLSIFRRAFG* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0829 289 Gene3D - 153 245 IPR038408 -
Pvu10g0829 289 Gene3D - 39 147 IPR038408 -
Pvu10g0829 289 ProSiteProfiles Gnk2-homologous domain profile. 149 247 IPR002902 -
Pvu10g0829 289 ProSiteProfiles Gnk2-homologous domain profile. 40 147 IPR002902 -
Pvu10g0829 289 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 14 287 - -
Pvu10g0829 289 Pfam Salt stress response/antifungal 47 144 IPR002902 -
Pvu10g0829 289 Pfam Salt stress response/antifungal 160 242 IPR002902 -
Pvu10g0829 289 PANTHER PLASMODESMATA-LOCATED PROTEIN 8 14 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0829 Pvu-Chr10 29740966 29743831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0829 94 284 Receptor kinase-like Gene Family AT5G40380 27.835 7.19e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0829 - - gmx:100809227 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0829 10 29740966 29743831 Pvu10g0829 10 29740966 29743831 ECH