Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0827 ATGCTGAGAAAATGCCCAAACCATGGGTTTGAAGATATTGCTCAACTAAGCATATTTATTAATGGTCTCAGATCAAATACAAAGATGCTCCTAGATGCCGTGGCTGGTGGCACAATGATGGTTCCTGATGCAAATCAAGCAATGAGGATTATAGAAGTTTTGGCCACAACTGACTATCAAGCTCAACATGATAGACAAAATCATAAAAAAAGAGGAGTATTGGAGTTAAACACTGCAAATGCATTGCTAGCTCAAAACAAAATTCTGACACAACAACTTGAGCAAATGACCGCACATATGACCCTATTACCCCAAAAGTTTCATGCTGTTCAATCACTCCAAAGTCAAAATGTACCTCTCAGGTGTGATTTTTGTGGAGGTGATCATCCTAATGGTCACTGTTCTTATCAGAATAACGCATATGAAGCTGAAGTGAATTATATGGGAAATCAAGGAAGGCAAGGCGGTTTTTCCTACAATTATCCTCAAGGTTGGAAAAATAATCAAAATCAGAATTTTGGATGGAAGCAAGACTATAATTCATCCAACAAGCAAGGGCCTTTCCAACAGCAACATCAATCGAATTCTCCATCTATTCCTGACAGGATGAATAAAGTGGAAGATGTTTTGTCAAAGATTATGAGTGCACAGGAAAATAGTATGGCTTCGATTAGGAGCATGGAAACTCAAATAGAACAGCTAGCTAAACAAATGTCGCAACTCACACAAATTGTAGATGGGAAAATTGGCCAATTCTCAGCTAACACTACCACTAACCCTAAGGAGCATTGCAATAACATCACTACTGAGGGTGATGAGAAAACCAGAGAAGAAAATGGTGAGATGGTGAAGATTGAGAAGGAAAAAGGAGAAAATAGAAAAGAGGGAGAAAAATGTGAAGTTGTAGAGAGTAGAGTTTCAAAAGAATTATCTCATTCTCTTATGCATGCTCTATTAGATTTAGGGTCAAGTATAAATTTGATGCCACTAACCATGTTAAGACAGATAGGTGACTTGAAGGTTAAAACCACTAAGATACAATTACAATTGGCTGACAGAACGGTGAAACATCCTTATGGTGTGGTGGAAGATGTCCTCACAAAGGTAGACAAATTCATGTTCCCAGTAGATTTTGTTATCTTGGACATGAAAGAAGACGAGGAAGTCCCTTTAATTCTCGACAGACCTTTCATGAAGACTGCTAAAGTTATAGTAGATGTAGACAAAGGAGAACTTAAAGTAAGGTCTCTTGATGAAGAGGTAAGATTTAATCTTTTTGATGATGTAACTAACTGGATTACAGATAAGAATGGGAGACAAGAGGAAATATCAAAAGATGGTGAGCTTTTGGAGGGCTCAAAGCCAAAGGAGGAAGTTACTCGTCATGAAAAGTTAAAGGCAAAAGGAGACCGGAACAATCAAGGGAAGCTAGTGGAAGAAGATGGATATCAGCCATGA 1458 0.3813 MLRKCPNHGFEDIAQLSIFINGLRSNTKMLLDAVAGGTMMVPDANQAMRIIEVLATTDYQAQHDRQNHKKRGVLELNTANALLAQNKILTQQLEQMTAHMTLLPQKFHAVQSLQSQNVPLRCDFCGGDHPNGHCSYQNNAYEAEVNYMGNQGRQGGFSYNYPQGWKNNQNQNFGWKQDYNSSNKQGPFQQQHQSNSPSIPDRMNKVEDVLSKIMSAQENSMASIRSMETQIEQLAKQMSQLTQIVDGKIGQFSANTTTNPKEHCNNITTEGDEKTREENGEMVKIEKEKGENRKEGEKCEVVESRVSKELSHSLMHALLDLGSSINLMPLTMLRQIGDLKVKTTKIQLQLADRTVKHPYGVVEDVLTKVDKFMFPVDFVILDMKEDEEVPLILDRPFMKTAKVIVDVDKGELKVRSLDEEVRFNLFDDVTNWITDKNGRQEEISKDGELLEGSKPKEEVTRHEKLKAKGDRNNQGKLVEEDGYQP* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0827 485 Coils Coil 79 99 - -
Pvu10g0827 485 MobiDBLite consensus disorder prediction 443 477 - -
Pvu10g0827 485 Gene3D Acid Proteases 306 426 IPR021109 -
Pvu10g0827 485 Coils Coil 224 244 - -
Pvu10g0827 485 MobiDBLite consensus disorder prediction 443 485 - -
Pvu10g0827 485 MobiDBLite consensus disorder prediction 252 278 - -
Pvu10g0827 485 PANTHER - 316 431 - -
Pvu10g0827 485 PANTHER - 316 431 - -
Pvu10g0827 485 MobiDBLite consensus disorder prediction 178 202 - -
Pvu10g0827 485 CDD retropepsin_like 316 399 - -
Pvu10g0827 485 MobiDBLite consensus disorder prediction 178 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0827 Pvu-Chr10 29654585 29656284 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0827 - - pvu:PHAVU_010G079600g 964.14