Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0825 ATGACAAACCTAATTCCAAACGAGGTCCATTACACGGATCACATGATGCCATTCAGCTTGGTTAAAGACCAAAGTTTTAAGTATGTTATTTACCATGAAATTCCTTTTGACAACATCTTCCAATATGCTTTTTGGTCTCCCATTCTTCCTCTTAATAGGGTTAAAACTGAATTTAGGCGTATCAAGGGGAACATTAACTCAATGAGGGAACATGCAGAGCTTTTGAGTTCTGTCAGGGATGATATTACTGACTTTAAGACATCCGGCAGTATGTCTCCAAGAATGCAGTTGCTACGGGAGAGGGCTGCCATCCATGGAAATATATCTCATATAGATGATGTGATTAGTCAAGCTCAAGCAACAAGAGCTGTGTTGGGTTCTCAGAGAACCTTGTTTACTGATGTTCAAGGAAAAGTGAAAGGTCTTGGTGACAAGTTCCCCATGATTCGAAGCCTTCTTGGTTCGATAAGAAGGCGGCGTTCAAGGGATACTCTTATTCTGTCAGCAGTAATTGCTGCTTGTACGTTGTTTCTCATCATTTATTGGCTTTCAAAGTGA 558 0.405 MTNLIPNEVHYTDHMMPFSLVKDQSFKYVIYHEIPFDNIFQYAFWSPILPLNRVKTEFRRIKGNINSMREHAELLSSVRDDITDFKTSGSMSPRMQLLRERAAIHGNISHIDDVISQAQATRAVLGSQRTLFTDVQGKVKGLGDKFPMIRSLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0825 185 Pfam Snare region anchored in the vesicle membrane C-terminus 96 160 - -
Pvu10g0825 185 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-2 56 185 - -
Pvu10g0825 185 PANTHER GOS-28 SNARE- RELATED 56 185 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0825 Pvu-Chr10 29556643 29558811 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0825 K08495 - gmx:100500645 228.409