Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0821 ATGGCTGCTCTCAAGTTTGCATGCGTAGTTGCGGTGATGAGTATGGTGCTTGTGACTGCACCCTTGGCACGTGCGATCACGTGCGGGCAAGTGGTCAGGACACTATCTCCATGCCTCAGTTACGTTCAGAGTAGTTCTGCCGGAGTGCCGCCGGCGCAGTGCTGCAGAGGAGTGAGCACCCTCAACCGCGAGGCGAGGACCACCGGCGACCGCCGGATCACGTGCAATTGCCTGAAATCATTTGTTGCTTCCTCTTCTAGGTTTAATTTCGATACCGCAGCTTCACTCCCACGAAGATGTAGAGTGAGGATCCCCTACAGGATTAGCCCTTCCACAAACTGCAACGGTTTGCACAATATTACAGGATCAGATAATGGCTAA 381 0.5354 MAALKFACVVAVMSMVLVTAPLARAITCGQVVRTLSPCLSYVQSSSAGVPPAQCCRGVSTLNREARTTGDRRITCNCLKSFVASSSRFNFDTAASLPRRCRVRIPYRISPSTNCNGLHNITGSDNG* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0821 126 SMART aai_6 28 114 IPR016140 -
Pvu10g0821 126 CDD nsLTP1 26 115 - -
Pvu10g0821 126 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 25 117 IPR036312 -
Pvu10g0821 126 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 116 - -
Pvu10g0821 126 ProSitePatterns Plant lipid transfer proteins signature. 96 117 IPR000528 GO:0006869|GO:0008289
Pvu10g0821 126 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Pvu10g0821 126 PRINTS Plant phospholipid transfer protein signature 49 63 IPR000528 GO:0006869|GO:0008289
Pvu10g0821 126 PRINTS Plant phospholipid transfer protein signature 70 85 IPR000528 GO:0006869|GO:0008289
Pvu10g0821 126 PRINTS Plant phospholipid transfer protein signature 87 104 IPR000528 GO:0006869|GO:0008289
Pvu10g0821 126 PRINTS Plant phospholipid transfer protein signature 105 116 IPR000528 GO:0006869|GO:0008289
Pvu10g0821 126 Gene3D - 25 118 IPR036312 -
Pvu10g0821 126 PANTHER - 1 116 IPR000528 GO:0006869|GO:0008289
Pvu10g0821 126 Pfam Protease inhibitor/seed storage/LTP family 28 114 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0821 Pvu-Chr10 29155260 29162144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0821 6 118 Acyl Lipid Metabolism Gene Families AT5G59320 44.248 4.18e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0821 - - pvu:PHAVU_010G079000g 256.529