Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0819 AGTGAGGAATTTATTATGTCTGGTAGTTTCCCTGTAGTGCTGTCTAAAAGGAAAGTGAGGAATTATTCACTCTCTTGGTCACCTAGTTCCAATTCAATTGGTGACAAACACCCTCAGTTAATGTCAAATTTTCAATTTTCAATTTGTCCATCAACTACCACTATTACTGCTTTTAAACCAAGAAATTTCAAGAGAACTCGAGTTGATGTAGAAGTGACTAAGTCCAGTGGAGACCATTTTGAAAATACCAAGTTACCACTTACAAAGAAAGTTTCACAGACTAACTTGTCAACTCCCAATGATGAATCGCCTCAATGTTGTTGGAAGAAACCTGATTCTGTCAATACATCTTATTATAATAGAAACAGCCGTTCAAACTATGCTGCAGTCGGTGGTCAGAAGTTGGATTCTTCAGTTAACAGGCCACAGTTCAGACCATATGACATTTGCTTTCATAGAAGAAGAAATCATGCTTTGATAGGAGCTACTTTGCCTGTACAAAACAAGGGAAGTAGAATTGAGATTCAGGAGGAATGGACAAAAGGGTTTGTGTTGAGACCTGGTATGGTTCTATTGAAAAAATTCATAAGCCATGATGAACAGGTGGGGATAGTGAAAGTTTGTCGTGAACTTGGTCTTGGTCTTGGAGGATTCTATCAACCAGGATATGCAAATGGAGCGAAACTTCGATTGAAGATGATGCCTCCACGTCACCTTTGCGGAGATCCGGCGACGTGCGGTAGCACCCCACCTAGTATTCCCAATCATTTCACAAAACTAGTTACAAGAGCAATCCAAGAAGCTCAGTCTCTAACTAAAGAGGAATATAGAGAATGTAATGTGGAGGACGTTCTTCCTTCTATGACTCCTGATATTTGCATCGCCAATTTTTATACAAATAATGGAAAACTTGGCCTTCATCAAGCAAAGAGTGTAATTCTGGAATCTGGAGATGTGTTGATATTTGGTGGTGAATCTCGACATGTTTTCCATGGTGTGCCATCAGTTTTACCAAATTCAGCTCCAAAACAATTGTTGAGAGATTCTTGTCTTTCTCCTGGTCGACTCAATCTTACCTTCAGACAATATTAA 1092 0.3929 SEEFIMSGSFPVVLSKRKVRNYSLSWSPSSNSIGDKHPQLMSNFQFSICPSTTTITAFKPRNFKRTRVDVEVTKSSGDHFENTKLPLTKKVSQTNLSTPNDESPQCCWKKPDSVNTSYYNRNSRSNYAAVGGQKLDSSVNRPQFRPYDICFHRRRNHALIGATLPVQNKGSRIEIQEEWTKGFVLRPGMVLLKKFISHDEQVGIVKVCRELGLGLGGFYQPGYANGAKLRLKMMPPRHLCGDPATCGSTPPSIPNHFTKLVTRAIQEAQSLTKEEYRECNVEDVLPSMTPDICIANFYTNNGKLGLHQAKSVILESGDVLIFGGESRHVFHGVPSVLPNSAPKQLLRDSCLSPGRLNLTFRQY* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0819 363 Pfam 2OG-Fe(II) oxygenase superfamily 188 308 IPR027450 -
Pvu10g0819 363 Pfam 2OG-Fe(II) oxygenase superfamily 310 361 IPR027450 -
Pvu10g0819 363 SUPERFAMILY Clavaminate synthase-like 185 363 - -
Pvu10g0819 363 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 3 309 IPR004574 -
Pvu10g0819 363 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 309 363 IPR004574 -
Pvu10g0819 363 PANTHER 2OG-FE(II) OXYGENASE FAMILY PROTEIN 309 363 - -
Pvu10g0819 363 PANTHER 2OG-FE(II) OXYGENASE FAMILY PROTEIN 3 309 - -
Pvu10g0819 363 Gene3D - 310 363 IPR037151 -
Pvu10g0819 363 Gene3D - 183 309 IPR037151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0819 Pvu-Chr10 28027898 28031366 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0819 - - pvu:PHAVU_010G078800g 729.169