Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0818 ATGGAGGTAAGCTTCTTCTTCTCCAACTTTCCACACGATCATGATGAGAGGGATATGTGGAAGATTTTTCAGAGACGGGGGAGGATAAAAGATATCTTTATCTCAAGAAGGTTAAACATCAAGAGACAAAGGTTCAGATTTGTGAGGTTCCACGAGGTGGTAGAGGAAGATGAACTGGAAAGAAGGTTGAACGCCATTTGGATTGGGACTTGGAAGCTGAGGGCTAATAAAGCAAAGTATACGAAGGTAACAGGGACATCTATAGAGCGGAACGCAGACCTGAATGGCTTGAAAGCAACACAGCAGAGGCAGGAACGAAGGGTAGCTCACCGGGCTCACACTCATCCACCGGCTGGGTTCAACAACAAGCGTTCCTACGCACAGGCAGTGACCATGGACCGTCGACAACCTTTCATTCAGGCAAAAGGGCACACTGAACTGAACATGGCCCATATCAATGGGGTGAAGGAGGAGGTTGAATGGTTGAGGAACAATTTTGTTGGAAAACTGTCTGACGTAGGGATGGTGCAGGTGGTAAAGGAGAGTTTCATCATGGAAGGCGTTGATTTCATCAGAGTAAGATATTTAGGTGGCCAGTATGTGCTCTTGACAGGGGAATCGGATGGGATGATCCAGAAGACGTTAAAAAATAACAAGGAGATGATGGCAGCCCTTTTCGAGTCCATTGTCCCGTGGGAGGAGAGTTTTGCAGTAGATGAAAAGGTGGCATGGATTAGATGCAGAGGACTACCTCTTAGCATGTGGAACAGAGGATGCTTTGAACGTGTTGCTGCTCAAGTAGGATCCTTTGTGGAGGTAGACGGAGCTACGTTGGAATTCGAAGTTGTGGAGTTCGCAAGGCTAAGAGTAAGGGCACCGGTGGGACGAGCCATTCACATGGTGATGGATATGAAGATCAACGATACTCTCTGCCAGGTTGTCTTGGAAGAAGAAATCCCTTCGCTAAACACATGTGGGTATTGCTTGCATGGCAGAGGGAGTGAGGCACGACGAGACGATTCAGACGAGGGGTTGGAGGAAAAGTTTGGCGAGGATGTGCTAGAATCGGAGGGCTCCGACGTGGATGCTCAAGATTTTGAGGGGAGGAAAGGCGTCGAAGAATGCTCGGTAAAGTTCTCGGCGGTGGACGCGGTGGGGGAAGGGGGTGGCGCCAGCACAGGTAGCTCTAGCAAGGACGCGGGGTCTAGGGCTGAGAGTAGGTTGCCATTTTTGGAGGAGCAAGTAGGTTGTTCGTGGAAAGCAAGTGCAGACAGGGCTCATTTTAAGCATGCGCCAGTGCAGAAGGAGGATGGGACATCTAAGAGATTGTCAACGGCTAGTAGAAGTGCAAATGCGTCTGACCTAATTGTTAATGGGCTAGATAAGGCCCAATTACACGAAGGGAGTGAGTTTAGTATCTTTGTGGGTCTGGGCTTGAAACAAATGGAAGCTGAGCAGTTAGGAGGGGTGTCGTTAGCAAGGAACACAAAGACAGGGGTGGATGATGCGGTGGAGGCCAGGGCTAGCAAATCCGACGACGAGAAGAGTGACGACAATCCCAGGGATGGTAGCAGCAGGTCCCCGTCCAGGGTAGAGGCAAGCGGGGAGGATGTAGTGGGCAAAGTGAAGAACACGGAGGAAGACGACGGAACGGGGATGTTTGCGCCGAGGACGAGGGGCTCTGAACGCCTAGGCGAACCGTCTCCGACCAGCCCAACTACTCAGGCGTATCACATCCGCACCAGGGCTAGGGTGAAGGCGATTGACACAGGTGCAATGAGCGGTGATGCGAAGAGGATGACGAAGAAGGTTGATGACGAAAGGAAGATGGCAAAGGCGAGTGGGGGGCGCAAATCTGTCATTAAAGAAGGGAGATTGCGTCCCAGTCCGGTAGGCGGAAGGAGAGGCATGGTGGAGGACATTTCTCAGGCGGTGGTCGTGTCCAGTCGGCAGGATGAAAGGGTTGGTGCTCTGAGCGGTAACAACTTGTCTGACGGAGCTGTTAGGAATTGCAATAGGCTGTATTGGATCAACAATGAGCACTCAGAAGCGGTGAGAATCTGGACCATCGGAAAGGAATTGGGATTCACCTTCTCGGGTGAGGAGGAAGTGGTGGTTGGCCGTATTCAAGCTATGGAAATTTGGTATAAGGCAGGAGTCAGGAAGGAAAGTGTAAGCAGAGTGGAGAACAGTATATCTGATGATGAAGGTTGA 2214 0.5086 MEVSFFFSNFPHDHDERDMWKIFQRRGRIKDIFISRRLNIKRQRFRFVRFHEVVEEDELERRLNAIWIGTWKLRANKAKYTKVTGTSIERNADLNGLKATQQRQERRVAHRAHTHPPAGFNNKRSYAQAVTMDRRQPFIQAKGHTELNMAHINGVKEEVEWLRNNFVGKLSDVGMVQVVKESFIMEGVDFIRVRYLGGQYVLLTGESDGMIQKTLKNNKEMMAALFESIVPWEESFAVDEKVAWIRCRGLPLSMWNRGCFERVAAQVGSFVEVDGATLEFEVVEFARLRVRAPVGRAIHMVMDMKINDTLCQVVLEEEIPSLNTCGYCLHGRGSEARRDDSDEGLEEKFGEDVLESEGSDVDAQDFEGRKGVEECSVKFSAVDAVGEGGGASTGSSSKDAGSRAESRLPFLEEQVGCSWKASADRAHFKHAPVQKEDGTSKRLSTASRSANASDLIVNGLDKAQLHEGSEFSIFVGLGLKQMEAEQLGGVSLARNTKTGVDDAVEARASKSDDEKSDDNPRDGSSRSPSRVEASGEDVVGKVKNTEEDDGTGMFAPRTRGSERLGEPSPTSPTTQAYHIRTRARVKAIDTGAMSGDAKRMTKKVDDERKMAKASGGRKSVIKEGRLRPSPVGGRRGMVEDISQAVVVSSRQDERVGALSGNNLSDGAVRNCNRLYWINNEHSEAVRIWTIGKELGFTFSGEEEVVVGRIQAMEIWYKAGVRKESVSRVENSISDDEG* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0818 737 MobiDBLite consensus disorder prediction 536 553 - -
Pvu10g0818 737 PANTHER RNA RECOGNITION MOTIF 4 398 - -
Pvu10g0818 737 MobiDBLite consensus disorder prediction 334 362 - -
Pvu10g0818 737 CDD RRM_SF 6 76 - -
Pvu10g0818 737 MobiDBLite consensus disorder prediction 430 449 - -
Pvu10g0818 737 Gene3D - 2 84 IPR012677 -
Pvu10g0818 737 Pfam Domain of unknown function (DUF4283) 191 290 IPR025558 -
Pvu10g0818 737 MobiDBLite consensus disorder prediction 501 525 - -
Pvu10g0818 737 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 4 398 - -
Pvu10g0818 737 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 3 80 IPR000504 GO:0003723
Pvu10g0818 737 SUPERFAMILY RNA-binding domain, RBD 6 84 IPR035979 GO:0003676
Pvu10g0818 737 MobiDBLite consensus disorder prediction 596 618 - -
Pvu10g0818 737 MobiDBLite consensus disorder prediction 501 575 - -
Pvu10g0818 737 MobiDBLite consensus disorder prediction 593 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0818 Pvu-Chr10 27975589 27977802 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0818 - K23450 pvu:PHAVU_011G184000g 984.171