Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0816 ATGCAACACAACATCTTCCAAACAATGCGTAGCTTGAAGATCATTGAAGGTTGCAAGGGAACTCAGGTGTATACTATCAACCCCTCCTCCGGCACCGGCACCGGCACCGGCACTGGCAGTGGAATTGGCGATAAGCTTCTCCAACAACTCCACGACCACATTAAGAGCCAAACCCTTATAAGGACCAAATCGAATCGGAACTTCCAACCTCCTAACGCCACCCCACCTTCCGAGGTTGTCTTCTGTGATGGGTCCCTCCTCCCCTATGCCCTCCCCATGACAGACCTTCTTGAACCCAAAGTCGAACCGTCCCTCGTGTCTCTTGACTTCGTTGAAACCCTCGCCAGTGCGTATCGTCGTGCTGAGGACCGGCCCCAGTTCGAGCGCACGGAGGTCTTCCTCGAGCAATGCACCATCTTTCGCGGGTTAGCAGACCCCAAGCTCTTCCGTCGCAGCCTTCGCTCAGCTCGACAACATGCTACTAACGTGCATGATAAGGTCGTGGTCGCCGCGTGGCTCCGCCACGAGCGCCGCGAGGACGAGCTCATCGGCTCCTCTTCCATGGACTGCAGCGGGAGGAACCTCGAATGTCCCCGCGCCACGTTGGAGCCAGGTTATGACCCAGAGTCGGTGTTTGATCGTTGCCTGTGCACGCATGCACGCGCAGGGGATCATGATAGTGACGATGCTCATAGTGAAATGACGATAGAGGTTGATGATGAGCCAAGTTCTACCTCGGAGGAAGAGGATGGTGACATGTCGTTTTTTGTTGGTGAAGATGAAATTAGGTGCAATAGGTTCAACATAGCTTCACTTTCAAGGCCCTTTAACACAATGTTGTATGGTGAATTCATAGAGTCAAAAAGGGAGAACATTAATTTTTCACAAAATTGTTTTTCTGTTGAGGCACTGACAGCTGCTAAGGAGTTTAGTAGAAGTAAGAGTTTGAGCCATTTGGAGCCTAAGGTGGTTTTGGAGTTGTTGTCTTTGGCGAATCGTTTTTGTTGTGAGGAGATGAAGAATGCTTGTGACGCACATTTGGCTTTGCTAGTTTGTGACATGGACGATGCCTTGTTGCTTATTGAATATGGTTTGGAGGAGACTGCATACCTTCTTGTGGCAGCTTGCTTGCAGGTGTATCTCCGAGAGCTCCCCGGTTCGATGCAGTGTTCGATTTTCGTGAAGATGTTTTGTAGTCCGGAGGGTAGGGATAGGCTAGCTATGGCGGGGCACGCGTCATTTGTGCTGTATTACTTTTTAAGTCAGATTTCGATGGAGGAAGAGATGAGATCTAACACCACAGTAATGTTATTGGAGAGGTTAGTGGAGTGCGCAAAAGATGGTTGGGAGAAGCAAGTTGCGTTTCACCAAATGGGTGCTGTTATGCTTGAGAGAAAAGAATACAAAGATGCACAACATTGGTTTGAGTCAGCAGTGGAGGCAGGGCATGTTTATTCAGTGGTGGGAGTAGCAAGGGCCAAATATAAGCGTGGTCACACCTATTCAGCATATAAGTTGATGAACTCACTTATTTCTGAACATAAACCAGTTGGGTGGATGTATCAAGAGAGGTCTTTGTATTGTATTGGGAAGGAGAAACAAATGGACTTGCTATCTGCAACTGAGTTAGATCCAACTCTTTCCTTTCCTTATAAATTTCGAGCTGTTTCTTACTTGGAAGAGAACAAAATTGGATCTGCCATTGCAGAAATCAATAAAATAATCGGTTTCAAGGTTTCTTCAGATTGCCTTGAACTCAGAGCTTGGTTCTTGATTGCCATGGAGGATTATGAAGGTGCCCTTAGAGATGTTCGGGCAATTTTGACGTTGGATCCAAATTATATGATGTTTTATGGGCATATGCATGGGGAGCAGTTGATAGAACTTCTCAGTCCTGTTGTTCAACAGTGGTGCCAAGCTGATTGTTGGATGCAGTTGTATGATCGGTGGTCCTCTGTTGATGATATTGGTTCATTGGCTGTTGTACACCAAATGTTAGCAAATGATCCTGGGAAAAGTCTTTTACGTTTTCGACAATCTCTCCTTTTGCTACGGTTGAATTGTCCAAAGGCTGCCATGCGTAGTTTGCGGATGGCTAGAAATCATTCTAATTCTGACCATGAAAGACTTGTGTATGAAGGATGGATATTGTATGACACTGGTCATCGTGAAGAAGCACTAACAAAGGCTGAGGAATCTATTACAATTCAAAGATCATTTGAAGCTTACTTTCTCAAAGCTTATGCATTAGCTGACTCAAATCTTGATTCAGAGTCTTCTAAGTATGTGATCCATCTCTTAGAAGAAGCTCTTAGGTGCCCTTCAGATGGTCTTAGGAAAGGACAAGCACTAAATAATCTAGGGAGTGTCTATGTAGACTGTGATAAACTAGACCTTGCTGCTGACTGCTACATGAATGCACTCAACATCAAGCATACACGAGCACATCAAGGATTGGCACGTGTATATCATCTTAAAAATCATCGCAAAGCAGCATATGATGAGATGACAAAGCTAATAGAAAAGGCTCGTAGCAATGCATCAGCATATGAGAAACGTTCAGAATATTGTGATCGTGACATGGCAAAGAGTGATCTTAGTATGGCCTCACAATTGGATCCTCTCAGGACTTATCCTTACAGATATAGGGCAGCAGTTTTGATGGATGATCACAAGGAATCTGAGGCAATAGCAGAGCTTTCAAGAGCCATTAATTTTAAGCCAGATCTACAACTATTACATCTTCGAGCAGCATTTTATGACTCAATGAGTGACTTCGTTTCTGCCGTTCAGGACTGTGAAGCAGGCCTCTGTCTTGATCCTAATCATAACGAAATTCTTGATCTTTGTAAGAAAGCACGAGAGCATCTTAGAGAACCAAAGTAG 2886 0.4511 MQHNIFQTMRSLKIIEGCKGTQVYTINPSSGTGTGTGTGSGIGDKLLQQLHDHIKSQTLIRTKSNRNFQPPNATPPSEVVFCDGSLLPYALPMTDLLEPKVEPSLVSLDFVETLASAYRRAEDRPQFERTEVFLEQCTIFRGLADPKLFRRSLRSARQHATNVHDKVVVAAWLRHERREDELIGSSSMDCSGRNLECPRATLEPGYDPESVFDRCLCTHARAGDHDSDDAHSEMTIEVDDEPSSTSEEEDGDMSFFVGEDEIRCNRFNIASLSRPFNTMLYGEFIESKRENINFSQNCFSVEALTAAKEFSRSKSLSHLEPKVVLELLSLANRFCCEEMKNACDAHLALLVCDMDDALLLIEYGLEETAYLLVAACLQVYLRELPGSMQCSIFVKMFCSPEGRDRLAMAGHASFVLYYFLSQISMEEEMRSNTTVMLLERLVECAKDGWEKQVAFHQMGAVMLERKEYKDAQHWFESAVEAGHVYSVVGVARAKYKRGHTYSAYKLMNSLISEHKPVGWMYQERSLYCIGKEKQMDLLSATELDPTLSFPYKFRAVSYLEENKIGSAIAEINKIIGFKVSSDCLELRAWFLIAMEDYEGALRDVRAILTLDPNYMMFYGHMHGEQLIELLSPVVQQWCQADCWMQLYDRWSSVDDIGSLAVVHQMLANDPGKSLLRFRQSLLLLRLNCPKAAMRSLRMARNHSNSDHERLVYEGWILYDTGHREEALTKAEESITIQRSFEAYFLKAYALADSNLDSESSKYVIHLLEEALRCPSDGLRKGQALNNLGSVYVDCDKLDLAADCYMNALNIKHTRAHQGLARVYHLKNHRKAAYDEMTKLIEKARSNASAYEKRSEYCDRDMAKSDLSMASQLDPLRTYPYRYRAAVLMDDHKESEAIAELSRAINFKPDLQLLHLRAAFYDSMSDFVSAVQDCEAGLCLDPNHNEILDLCKKAREHLREPK* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0816 961 SUPERFAMILY TPR-like 660 754 IPR011990 GO:0005515
Pvu10g0816 961 Gene3D Potassium Channel Kv1.1; Chain A 243 392 IPR011333 -
Pvu10g0816 961 MobiDBLite consensus disorder prediction 224 251 - -
Pvu10g0816 961 Gene3D Tetratricopeptide repeat domain 675 842 IPR011990 GO:0005515
Pvu10g0816 961 Gene3D Tetratricopeptide repeat domain 435 618 IPR011990 GO:0005515
Pvu10g0816 961 MobiDBLite consensus disorder prediction 224 238 - -
Pvu10g0816 961 PANTHER ETHYLENE-OVERPRODUCTION PROTEIN 1 1 959 - -
Pvu10g0816 961 Gene3D Tetratricopeptide repeat domain 843 961 IPR011990 GO:0005515
Pvu10g0816 961 SMART tpr_5 781 814 IPR019734 GO:0005515
Pvu10g0816 961 SMART tpr_5 707 740 IPR019734 GO:0005515
Pvu10g0816 961 SMART tpr_5 581 614 IPR019734 GO:0005515
Pvu10g0816 961 SMART tpr_5 910 943 IPR019734 GO:0005515
Pvu10g0816 961 SUPERFAMILY TPR-like 545 909 IPR011990 GO:0005515
Pvu10g0816 961 SUPERFAMILY POZ domain 248 347 IPR011333 -
Pvu10g0816 961 ProSiteProfiles TPR repeat profile. 781 814 IPR019734 GO:0005515
Pvu10g0816 961 PANTHER ETO1-RELATED 1 959 IPR044631 GO:0010105
Pvu10g0816 961 Coils Coil 833 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0816 Pvu-Chr10 27501563 27506983 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0816 - - gmx:100799641 1652.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0965 8 9739103 9749876 Pvu10g0816 10 27501563 27506983 PCT