Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0805 GAATATGGCAAAGAAATGAGAAGGGTAGTAATTGGATTGGCGAGGGCAGTGTTTAAAAGCTTAGGGTTTGAAGAACACTTTGTAGAGAAGGCATTGGAATTGAAGTCAGGGTTTGATGTACTGGCCATGAACCTTTATCCACCCAATGCCAAATTCAAGGGAGCTGTTGGCTTGCCTCAACACACTAACCTTGGCTTTATAATTACACTTGTCCAAGATGTAAATGGTGGTCTCCAAATTCTTTCCCACAAAGGAAACTGGATTAATGCCTACATTCCTCATCATGCCATCCTCATCCAGCTTGGTGATCAACTTGAGATTTTAACCAATGGGATGTATAAGAGTCACATTCATCGAGTTATTGTTGACAACAATAAGGTGCAAAGGATATCTGTGGTTGGCCTTCATGGACCTTCACTGGACAAATTGATCAACCCTATCACAAAGTTTGTTAATGAAAAACATCCAAAGAAATATCGTGAGATGACTTTTAAAGAATTCTTGAAAGTGAACGGGGATGATGAGGTTGATGTGCAATCATCACTTGAGCAAGCAAGATTATAG 564 0.3989 EYGKEMRRVVIGLARAVFKSLGFEEHFVEKALELKSGFDVLAMNLYPPNAKFKGAVGLPQHTNLGFIITLVQDVNGGLQILSHKGNWINAYIPHHAILIQLGDQLEILTNGMYKSHIHRVIVDNNKVQRISVVGLHGPSLDKLINPITKFVNEKHPKKYREMTFKEFLKVNGDDEVDVQSSLEQARL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0805 187 Pfam 2OG-Fe(II) oxygenase superfamily 40 137 IPR044861 -
Pvu10g0805 187 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 186 - -
Pvu10g0805 187 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 37 138 IPR005123 -
Pvu10g0805 187 SUPERFAMILY Clavaminate synthase-like 1 170 - -
Pvu10g0805 187 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 1 186 - -
Pvu10g0805 187 Gene3D - 1 175 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0805 Pvu-Chr10 25304310 25305611 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0805 1 167 Glycosyltransferase AT5G59530 30.000 3.48e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0805 - - pvu:PHAVU_010G077500g 377.096