Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0792 ATGGCAACTTGGGTTTTATCAGAATGTGGTTTAAGGCCTCTTCCTCCTGCATTTCCACGGCCAACAAGGCCCATTTCGTGCCAAAAGCATTCAAAGTTTAGATTTTTTAGCACAAATAAGGGAGTTGCAGATCTGAAGCTCCAACCGAGAGGATTTACATGTTGCAACTATAGGGAGAGAAGGTGGGAATTGGGAGTGAGTACACCACTGAAGGTTGCCACCACCGAGGGAGAAGAAGAGAGCGTCAATGGCGTCAATGGGGTTGGTGAGGAACTACCTGAATTTGACCCTAGTGCACCACCACCCTTCAAACTGGCAGATATCAGAGCTGCCATTCCTAAACACTGCTGGGTGAAGGACCCTTGGAAGTCCATGAGTTATGTAGTGAGGGATGTCATTGTGGTTTTTGGGTTGGCTGCTGCTGCAGCTTATCTCAACAACTGGATAGTTTGGCCTCTCTATTGGGCTGCTCAGGGAACCATGTTCTGGGCCCTCTTTGTTCTTGGTCATGATTGTGGTCATGGAAGCTTTTCAAACAATCCCAAGTTGAACAGTGTTGCCGGGCACCTTCTGCATTCATCAATTCTAGTTCCATATCATGGATGGAGAATCAGTCATAGAACACATCATCAACACCATGGCCATGTTGAAAATGATGAATCATGGCATCCTTTGCCAGAGAAAATTTTCAACAGCTTGAACAATGTAACACGTACTTTAAGATTTACAATACCTTTTCCATTGCTTGCGTATCCCATCTACCTTTGGAATAGGAGTCCTGGGAAGACTGGTTCGCACTTTGATCCAAGCAGTGATTTGTTTGTCCCAAGTGAGAGAAAAGATGTTATTACTTCAACAATTTGCTGGACAGCTATGGCTGCCTTGCTTGTAGGTTTGGGATTTGTGATGGGTCCAGTTCAATTGCTTAAGCTTTATGGCATTCCCTATGTGCTTTTTGTTATGTGGTTGGATTTGGTGACTTATTTACATCACCATGGCCACGAAGACAAATTACCTTGGTATCGTGGAGAGGAATGGAGCTACCTTAGGGGTGGCCTTACAACTATTGATCGTGACTATGGATGGATCAATAACATCCACCATGACATTGGAACACATGTCATTCATCACCTTTTCCCTCAAATACCACACTATAACTTAATAGAAGCAACGGAGGCAGCTAAACCAGTTCTTGGCCAATATTACCGGGAGCCAAAGAAGTCTAGCCCTCTTCCATTTTACCTCATTGGAGAATTGATAACAAGCATGAAGAAAGACCATTTTGTCAGTGACACTGGGGATATTGTGTACTATCAAACAGACCCTACAATTAGTAACACTTCCAAATCACAGTGA 1356 0.4388 MATWVLSECGLRPLPPAFPRPTRPISCQKHSKFRFFSTNKGVADLKLQPRGFTCCNYRERRWELGVSTPLKVATTEGEEESVNGVNGVGEELPEFDPSAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVIVVFGLAAAAAYLNNWIVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVAGHLLHSSILVPYHGWRISHRTHHQHHGHVENDESWHPLPEKIFNSLNNVTRTLRFTIPFPLLAYPIYLWNRSPGKTGSHFDPSSDLFVPSERKDVITSTICWTAMAALLVGLGFVMGPVQLLKLYGIPYVLFVMWLDLVTYLHHHGHEDKLPWYRGEEWSYLRGGLTTIDRDYGWINNIHHDIGTHVIHHLFPQIPHYNLIEATEAAKPVLGQYYREPKKSSPLPFYLIGELITSMKKDHFVSDTGDIVYYQTDPTISNTSKSQ* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0792 451 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 46 449 - -
Pvu10g0792 451 PANTHER TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTIC 46 449 - -
Pvu10g0792 451 Pfam Domain of unknown function (DUF3474) 1 140 IPR021863 GO:0016717
Pvu10g0792 451 CDD Delta12-FADS-like 119 387 - -
Pvu10g0792 451 Pfam Fatty acid desaturase 149 402 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0792 Pvu-Chr10 23638132 23641517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0792 1 451 Lipid Metabolism Gene Families AT3G11170 69.163 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0792 K10257 - gmx:100217335 866.3