Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0788 ATGATTCCTTCAGGGACAATGAAGCCTCCCAGAGTAAAGCTTCCTCTGCCCATCATTATCACCACAATCTGTGTTCTTCTCTTCATAGCAGTCTTGTATGCTGAGAGACTAAGTTTCCCTAACTCCAGCTCCATTTTCAAGTTCAAAGCATGTTCTAGAAAGCACACCAAATCAAAGTCTAATGATAAAAAAAGTGAGGAAGTGTTTGCAAATGCCTCATGGACTGATGATAGGTTCGATTTTGACCCAGAAGAGTGCAATGTTGCAAATGGAAAATGGGTATTTAATAGTTCATTGAAGCCTTTGTACTCGGACAGAAGCTGTCCATACATAGATAGACAATTTTCATGTGTCAAGAATGGAAGGAATGATTCTGACTACCTCCATTGGGAGTGGCAGCCAGAAGATTGCACCTTGCCCCCGTTTAGTCCAGAGCTGGCCCTCAAAAAGCTTCAAGGGAAGAGGCTACTATTTGTAGGAGATTCACTACAAAGAAACCAGTGGGAATCTTTTGTATGTTTGGTGCAAGGTGTGATACCTGAAAAGAAAAAGTCAATGAAACGAGGGCGTGTGCATTCAGTCTTCAAAGCCAAGGAATATAATGCAACCATAGAGTTCTACTGGGCACCATTTTTAGTGGAGTCCAACACTGACATTCATATCATAGGAGACCCCAAGAAGAGAATAATAAAAGTGGATGAAATCACGGAGCGTGCCAAAAACTGGACAGGAGTGGATATCCTTGTTTTCAATACCTATGTATGGTGGATGAGTGGCCTTAGAATAAAAGCACTATGGGGTTCATTTGGCAATGGAGAAGAAGGGTATGAAGAATTGGATACAGCAGTTGCTTACAAATTTGGTTTGAGGACGTGGGCCAATTGGGTTGACTCAACTATTGATCCAAACAAAACCCGGGTCTTCTTCACAACCATGTCCCCTGCACACACAAAAAGTGCAGACTGGGGCCACAAGGATGGTATCAAATGCTTCAATGAGACAAAGCCAGTGAAGAAGAAGAACCACTGGGGAAGTGGGTCTAACAAGGATATGATGAGTGTGGTGGCCAAAGTGGTGAAGAGAATGAAAGTTCCTGTGAATGTGATAAACATAACACAGATCTCAGAGTATAGGATTGATGGTCATTCTTCCATTTACAGTGAAACTGGGGGCAAAATTTTGACTGAGGAGGAAAGGGCCAACCCAAGAAATGCAGATTGCATTCATTGGTGTTTACCTGGAGTTCCAGATACATGGAATCAAATATTTTTGGCAATGTTGTAA 1284 0.4213 MIPSGTMKPPRVKLPLPIIITTICVLLFIAVLYAERLSFPNSSSIFKFKACSRKHTKSKSNDKKSEEVFANASWTDDRFDFDPEECNVANGKWVFNSSLKPLYSDRSCPYIDRQFSCVKNGRNDSDYLHWEWQPEDCTLPPFSPELALKKLQGKRLLFVGDSLQRNQWESFVCLVQGVIPEKKKSMKRGRVHSVFKAKEYNATIEFYWAPFLVESNTDIHIIGDPKKRIIKVDEITERAKNWTGVDILVFNTYVWWMSGLRIKALWGSFGNGEEGYEELDTAVAYKFGLRTWANWVDSTIDPNKTRVFFTTMSPAHTKSADWGHKDGIKCFNETKPVKKKNHWGSGSNKDMMSVVAKVVKRMKVPVNVINITQISEYRIDGHSSIYSETGGKILTEEERANPRNADCIHWCLPGVPDTWNQIFLAML* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0788 427 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 139 426 IPR026057 GO:0016740
Pvu10g0788 427 Pfam PMR5 N terminal Domain 84 137 IPR025846 -
Pvu10g0788 427 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 11 427 - -
Pvu10g0788 427 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 427 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0788 Pvu-Chr10 23491705 23494680 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0788 - - gmx:100790014 853.588